Variant report

Variant	rs11593017
Chromosome Location	chr10:23375723-23375724
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:23369106..23372082-chr10:23374959..23378263,3	K562	blood:
2	chr10:23320503..23322830-chr10:23375136..23377538,2	K562	blood:
3	chr10:23375345..23377248-chr10:23381230..23384056,2	K562	blood:

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11817587	0.88[CEU][hapmap];0.86[CHB][hapmap];0.95[JPT][hapmap];0.89[YRI][hapmap];0.92[AFR][1000 genomes];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12413082	0.84[CEU][hapmap];0.86[CHB][hapmap];1.00[GIH][hapmap];0.90[JPT][hapmap];0.85[MKK][hapmap];0.90[TSI][hapmap];0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1555800	0.90[JPT][hapmap];0.82[ASN][1000 genomes]
rs1555801	0.82[ASN][1000 genomes]
rs1555805	0.88[CEU][hapmap];0.81[CHB][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.91[TSI][hapmap];0.80[YRI][hapmap];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs16923014	0.93[CHB][hapmap];0.95[JPT][hapmap];0.88[ASN][1000 genomes]
rs1975958	0.81[CHB][hapmap];0.95[JPT][hapmap];0.81[ASN][1000 genomes]
rs1975959	0.81[ASN][1000 genomes]
rs2147940	0.88[CEU][hapmap];0.90[JPT][hapmap];0.80[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs2147945	0.88[AFR][1000 genomes];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2296467	0.93[CHB][hapmap];0.95[JPT][hapmap];0.88[ASN][1000 genomes]
rs2886428	0.88[CEU][hapmap];0.86[CHB][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.80[MKK][hapmap];0.91[TSI][hapmap];0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs55656603	0.82[ASN][1000 genomes]
rs56201167	0.84[ASN][1000 genomes]
rs61849886	0.89[ASN][1000 genomes]
rs61849887	0.91[ASN][1000 genomes]
rs61849888	0.92[ASN][1000 genomes]
rs61849889	0.91[ASN][1000 genomes]
rs6482253	0.81[CEU][hapmap];0.95[GIH][hapmap];0.90[JPT][hapmap];0.84[MKK][hapmap];0.88[TSI][hapmap];0.81[EUR][1000 genomes]
rs7084426	0.95[AFR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs722258	0.81[CHB][hapmap];0.90[JPT][hapmap];0.82[ASN][1000 genomes]
rs7919629	0.88[CEU][hapmap];0.85[JPT][hapmap];0.89[YRI][hapmap];0.82[AFR][1000 genomes];0.84[EUR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23366400-23383600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr10:23369200-23383800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr10:23371000-23383800	Weak transcription	Fetal Heart	heart

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