Variant report

Variant	rs1172946
Chromosome Location	chr10:97867636-97867637
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:97849405..97851373-chr10:97867555..97870050,2	K562	blood:

Variant related genes	Relation type
ENSG00000226688	Chromatin interaction

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs10128368	0.97[ASN][1000 genomes]
rs1029215	0.94[ASN][1000 genomes]
rs10509704	0.83[EUR][1000 genomes]
rs10509706	0.83[EUR][1000 genomes]
rs10732776	0.97[ASN][1000 genomes]
rs10748659	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10748660	0.83[EUR][1000 genomes]
rs10882731	0.84[EUR][1000 genomes]
rs10882732	0.83[EUR][1000 genomes]
rs11188585	0.96[ASN][1000 genomes]
rs11188633	0.84[EUR][1000 genomes]
rs11188634	0.84[EUR][1000 genomes]
rs11188642	0.84[EUR][1000 genomes]
rs11188643	0.83[EUR][1000 genomes]
rs1172937	0.84[EUR][1000 genomes]
rs1172940	0.85[EUR][1000 genomes]
rs1172943	0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1172952	0.97[ASN][1000 genomes]
rs1172953	0.86[ASN][1000 genomes]
rs1172955	0.82[ASN][1000 genomes]
rs1172958	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1172960	0.85[EUR][1000 genomes]
rs1172961	0.85[EUR][1000 genomes]
rs1172963	0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1177749	0.85[EUR][1000 genomes]
rs12766762	0.84[EUR][1000 genomes]
rs1344356	0.96[ASN][1000 genomes]
rs1414918	0.95[ASN][1000 genomes]
rs1414919	0.95[ASN][1000 genomes]
rs1624551	0.95[ASN][1000 genomes]
rs1764305	0.85[EUR][1000 genomes]
rs2446023	0.80[EUR][1000 genomes]
rs2901894	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3748226	0.83[EUR][1000 genomes]
rs3762090	0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7084542	0.80[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7099399	0.94[ASN][1000 genomes]
rs7475754	0.97[ASN][1000 genomes]
rs7901611	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97866600-97868000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr10:97867200-97867800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr10:97867200-97868000	Enhancers	K562	blood

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