The 2.0 version of rSNPBase

Variant report

Variant rs12075028
Chromosome Location chr1:179018746-179018747
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:178998400-179027400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr1:179002000-179019200 Weak transcription Adipose Nuclei Adipose
3 chr1:179003800-179025800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr1:179004200-179024200 Weak transcription Liver Liver
5 chr1:179004400-179019200 Weak transcription Duodenum Mucosa Duodenum
6 chr1:179004400-179024200 Weak transcription Fetal Kidney kidney
7 chr1:179004800-179024600 Weak transcription Primary B cells from cord blood blood
8 chr1:179006000-179024200 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr1:179006400-179024800 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr1:179006400-179032400 Weak transcription Esophagus oesophagus
11 chr1:179006800-179024200 Weak transcription Primary T regulatory cells fromperipheralblood blood
12 chr1:179007000-179024200 Weak transcription HUVEC blood vessel
13 chr1:179007600-179024200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
14 chr1:179008000-179019200 Weak transcription Brain Cingulate Gyrus brain
15 chr1:179008000-179033000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
16 chr1:179008400-179021600 Weak transcription Monocytes-CD14+_RO01746 blood
17 chr1:179008400-179023600 Weak transcription iPS-20b Cell Line embryonic stem cell
18 chr1:179008400-179033000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr1:179008400-179041000 Weak transcription Small Intestine intestine
20 chr1:179008600-179020600 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr1:179008600-179022200 Weak transcription Brain Inferior Temporal Lobe brain
22 chr1:179008600-179022200 Weak transcription Brain Substantia Nigra brain
23 chr1:179008600-179022200 Weak transcription Stomach Mucosa stomach
24 chr1:179008600-179023600 Weak transcription Primary T helper naive cells fromperipheralblood blood
25 chr1:179008600-179023600 Weak transcription Primary T helper cells fromperipheralblood blood
26 chr1:179008600-179024200 Weak transcription Primary B cells from peripheral blood blood
27 chr1:179008600-179024400 Weak transcription Hela-S3 cervix
28 chr1:179008600-179033000 Weak transcription Brain Angular Gyrus brain
29 chr1:179008600-179035000 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr1:179008600-179049800 Weak transcription Primary T helper naive cells from peripheral blood blood
31 chr1:179008600-179049800 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr1:179008800-179024400 Weak transcription NHDF-Ad bronchial
33 chr1:179008800-179024800 Weak transcription HMEC breast
34 chr1:179009400-179033000 Weak transcription Gastric stomach
35 chr1:179009600-179050400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr1:179011200-179022200 Weak transcription Fetal Intestine Large intestine
37 chr1:179011600-179023600 Weak transcription Dnd41 blood
38 chr1:179011600-179025400 Weak transcription iPS-18 Cell Line embryonic stem cell
39 chr1:179011800-179024800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr1:179011800-179025200 Weak transcription HUES6 Cell Line embryonic stem cell
41 chr1:179012000-179022600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr1:179012000-179025200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr1:179012200-179024000 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr1:179012200-179033000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
45 chr1:179012400-179025800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr1:179012600-179024200 Weak transcription Fetal Thymus thymus
47 chr1:179012600-179027600 Weak transcription Lung lung
48 chr1:179013000-179023800 Weak transcription Fetal Muscle Leg muscle
49 chr1:179013200-179019200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr1:179013200-179023600 Weak transcription Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015