The 2.0 version of rSNPBase

Variant report

Variant rs72707290
Chromosome Location chr1:179008325-179008326
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:178996200-179009200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:178996400-179011200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr1:178998200-179008600 Enhancers Colon Smooth Muscle Colon
4 chr1:178998400-179027400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr1:178999000-179009600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
6 chr1:179001200-179008600 Enhancers Primary B cells from peripheral blood blood
7 chr1:179001200-179009600 Enhancers Fetal Adrenal Gland Adrenal Gland
8 chr1:179001600-179017000 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr1:179001800-179008600 Enhancers Primary T helper cells PMA-I stimulated --
10 chr1:179001800-179016200 Weak transcription Aorta Aorta
11 chr1:179002000-179019200 Weak transcription Adipose Nuclei Adipose
12 chr1:179002800-179008600 Enhancers Primary T helper cells fromperipheralblood blood
13 chr1:179003200-179008600 Enhancers Primary T killer memory cells from peripheral blood blood
14 chr1:179003600-179009200 Weak transcription Right Ventricle heart
15 chr1:179003800-179011200 Weak transcription Thymus Thymus
16 chr1:179003800-179025800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr1:179004000-179011000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr1:179004200-179009200 Weak transcription ES-WA7 Cell Line embryonic stem cell
19 chr1:179004200-179010800 Weak transcription iPS-18 Cell Line embryonic stem cell
20 chr1:179004200-179024200 Weak transcription Liver Liver
21 chr1:179004400-179012800 Weak transcription Fetal Lung lung
22 chr1:179004400-179013000 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr1:179004400-179019200 Weak transcription Duodenum Mucosa Duodenum
24 chr1:179004400-179024200 Weak transcription Fetal Kidney kidney
25 chr1:179004800-179011200 Weak transcription Primary hematopoietic stem cells blood
26 chr1:179004800-179012200 Weak transcription Spleen Spleen
27 chr1:179004800-179024600 Weak transcription Primary B cells from cord blood blood
28 chr1:179005000-179009000 Enhancers K562 blood
29 chr1:179005200-179008600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
30 chr1:179005200-179008600 Enhancers Primary T helper naive cells from peripheral blood blood
31 chr1:179005200-179016400 Weak transcription Left Ventricle heart
32 chr1:179005400-179008600 Enhancers Primary T helper naive cells fromperipheralblood blood
33 chr1:179005400-179008800 Enhancers A549 lung
34 chr1:179005600-179008600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr1:179005600-179008800 Enhancers Primary T cells from cord blood blood
36 chr1:179005600-179008800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr1:179005600-179008800 Enhancers Osteobl bone
38 chr1:179005600-179009000 Enhancers NHEK skin
39 chr1:179005800-179008400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr1:179005800-179008800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr1:179005800-179008800 Enhancers Muscle Satellite Cultured Cells --
42 chr1:179005800-179008800 Enhancers HMEC breast
43 chr1:179005800-179008800 Enhancers HSMM muscle
44 chr1:179005800-179009000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr1:179006000-179008600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr1:179006000-179008600 Enhancers NHLF lung
47 chr1:179006000-179024200 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr1:179006200-179008400 Enhancers Primary monocytes fromperipheralblood blood
49 chr1:179006200-179008400 Enhancers Monocytes-CD14+_RO01746 blood
50 chr1:179006200-179008600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015