The 2.0 version of rSNPBase

Variant report

Variant rs72709451
Chromosome Location chr1:179062942-179062943
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:179052600-179064200 Weak transcription Fetal Brain Male brain
2 chr1:179053000-179072200 Strong transcription Primary T cells from cord blood blood
3 chr1:179053200-179063000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr1:179053200-179064000 Weak transcription Primary T killer naive cells fromperipheralblood blood
5 chr1:179053200-179067600 Strong transcription Primary hematopoietic stem cells short term culture blood
6 chr1:179053200-179071000 Strong transcription NHEK skin
7 chr1:179053200-179096000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr1:179053400-179067400 Strong transcription Fetal Intestine Small intestine
9 chr1:179053800-179066600 Strong transcription Sigmoid Colon Sigmoid Colon
10 chr1:179053800-179066800 Strong transcription Primary T regulatory cells fromperipheralblood blood
11 chr1:179053800-179067200 Strong transcription Thymus Thymus
12 chr1:179053800-179069000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr1:179053800-179074600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr1:179054000-179067600 Strong transcription Fetal Intestine Large intestine
15 chr1:179054000-179071000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr1:179054000-179074800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr1:179054000-179077200 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr1:179054000-179079400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr1:179054400-179067200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr1:179054400-179067800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
21 chr1:179054600-179066600 Strong transcription Fetal Brain Female brain
22 chr1:179054600-179067200 Strong transcription Rectal Mucosa Donor 31 rectum
23 chr1:179054800-179065600 Strong transcription Primary T helper naive cells fromperipheralblood blood
24 chr1:179054800-179066800 Strong transcription Primary T cells fromperipheralblood blood
25 chr1:179054800-179067200 Strong transcription Cortex derived primary cultured neurospheres brain
26 chr1:179054800-179067600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr1:179054800-179067800 Strong transcription Brain Germinal Matrix brain
28 chr1:179054800-179072200 Strong transcription Breast Myoepithelial Primary Cells Breast
29 chr1:179055800-179066400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr1:179056000-179065800 Strong transcription Primary T helper 17 cells PMA-I stimulated --
31 chr1:179056200-179066400 Strong transcription Primary T helper cells fromperipheralblood blood
32 chr1:179056200-179066600 Strong transcription Primary T helper cells PMA-I stimulated --
33 chr1:179056400-179067400 Strong transcription Fetal Thymus thymus
34 chr1:179056600-179066600 Strong transcription Rectal Mucosa Donor 29 rectum
35 chr1:179056600-179067800 Strong transcription Duodenum Mucosa Duodenum
36 chr1:179056600-179068000 Strong transcription Dnd41 blood
37 chr1:179057000-179067800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr1:179057200-179076800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr1:179057400-179068800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr1:179057600-179067200 Strong transcription HMEC breast
41 chr1:179058000-179067400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr1:179058200-179063200 Weak transcription ES-I3 Cell Line embryonic stem cell
43 chr1:179058800-179063000 Genic enhancers NHDF-Ad bronchial
44 chr1:179059000-179066800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr1:179059000-179066800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
46 chr1:179059200-179066600 Strong transcription HUES64 Cell Line embryonic stem cell
47 chr1:179059200-179096400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr1:179059400-179067000 Strong transcription Brain Cingulate Gyrus brain
49 chr1:179059400-179067800 Strong transcription iPS-20b Cell Line embryonic stem cell
50 chr1:179059400-179090400 Strong transcription HUVEC blood vessel

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Last update: Aug 31, 2015