The 2.0 version of rSNPBase

Variant report

Variant rs72709434
Chromosome Location chr1:179038196-179038197
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:179008400-179041000 Weak transcription Small Intestine intestine
2 chr1:179008600-179049800 Weak transcription Primary T helper naive cells from peripheral blood blood
3 chr1:179008600-179049800 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr1:179009600-179050400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:179025000-179050200 Weak transcription HUVEC blood vessel
6 chr1:179025400-179050600 Weak transcription Fetal Brain Male brain
7 chr1:179025600-179050000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr1:179025600-179050400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr1:179025800-179050200 Weak transcription Fetal Heart heart
10 chr1:179026200-179038400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr1:179027800-179042600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr1:179027800-179050600 Weak transcription Placenta Amnion Placenta Amnion
13 chr1:179028000-179039000 Strong transcription Primary T cells from cord blood blood
14 chr1:179028600-179050000 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr1:179028600-179050600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr1:179029200-179039600 Strong transcription Fetal Intestine Large intestine
17 chr1:179029600-179043200 Strong transcription Fetal Adrenal Gland Adrenal Gland
18 chr1:179030200-179038200 Strong transcription Duodenum Mucosa Duodenum
19 chr1:179030800-179038400 Strong transcription Rectal Mucosa Donor 29 rectum
20 chr1:179031000-179038400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr1:179031200-179039600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr1:179032400-179038400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr1:179032400-179039000 Strong transcription Breast Myoepithelial Primary Cells Breast
24 chr1:179032600-179038400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr1:179032600-179038400 Strong transcription Primary T cells fromperipheralblood blood
26 chr1:179032600-179038400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr1:179032600-179043200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr1:179032600-179043200 Strong transcription Fetal Muscle Trunk muscle
29 chr1:179032800-179038200 Strong transcription Primary T helper cells fromperipheralblood blood
30 chr1:179032800-179038400 Strong transcription Placenta Placenta
31 chr1:179032800-179039000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr1:179032800-179041600 Strong transcription Primary monocytes fromperipheralblood blood
33 chr1:179032800-179043600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr1:179033000-179038200 Strong transcription A549 lung
35 chr1:179033000-179038400 Strong transcription HUES6 Cell Line embryonic stem cell
36 chr1:179033000-179038400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr1:179033000-179038400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr1:179033000-179038400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
39 chr1:179033000-179038400 Strong transcription Liver Liver
40 chr1:179033000-179038400 Strong transcription Dnd41 blood
41 chr1:179033000-179038400 Strong transcription Monocytes-CD14+_RO01746 blood
42 chr1:179033000-179038400 Strong transcription Osteobl bone
43 chr1:179033000-179038600 Strong transcription Primary hematopoietic stem cells short term culture blood
44 chr1:179033000-179038600 Strong transcription Cortex derived primary cultured neurospheres brain
45 chr1:179033000-179038600 Strong transcription Adipose Nuclei Adipose
46 chr1:179033000-179038600 Strong transcription Fetal Brain Female brain
47 chr1:179033000-179038600 Strong transcription Fetal Thymus thymus
48 chr1:179033000-179038600 Strong transcription Stomach Smooth Muscle stomach
49 chr1:179033000-179038600 Strong transcription Spleen Spleen
50 chr1:179033000-179039200 Strong transcription Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015