The 2.0 version of rSNPBase

Variant report

Variant rs72709467
Chromosome Location chr1:179131517-179131518
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:179112400-179133000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr1:179112400-179139000 Weak transcription K562 blood
3 chr1:179113200-179133000 Weak transcription Hela-S3 cervix
4 chr1:179116200-179133000 Weak transcription NHDF-Ad bronchial
5 chr1:179116400-179133400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr1:179117800-179133000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr1:179117800-179186000 Weak transcription Fetal Stomach stomach
8 chr1:179119000-179135200 Weak transcription Primary hematopoietic stem cells blood
9 chr1:179119600-179133000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr1:179120200-179133800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr1:179121200-179136200 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr1:179121800-179135800 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr1:179121800-179138400 Weak transcription Aorta Aorta
14 chr1:179122000-179135000 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr1:179122000-179139000 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr1:179122000-179189400 Weak transcription Primary B cells from cord blood blood
17 chr1:179122400-179153000 Weak transcription Primary T cells from cord blood blood
18 chr1:179122800-179139000 Weak transcription Lung lung
19 chr1:179122800-179141600 Weak transcription Fetal Intestine Large intestine
20 chr1:179123000-179133000 Weak transcription Muscle Satellite Cultured Cells --
21 chr1:179123400-179133000 Weak transcription A549 lung
22 chr1:179123400-179136200 Weak transcription Colon Smooth Muscle Colon
23 chr1:179124200-179139000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr1:179126000-179133000 Weak transcription HepG2 liver
25 chr1:179127400-179139200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr1:179128600-179133400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr1:179128800-179133000 Weak transcription HSMMtube muscle
28 chr1:179129200-179132000 Weak transcription HSMM muscle
29 chr1:179130600-179136000 Weak transcription GM12878-XiMat blood

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Last update: Aug 31, 2015