The 2.0 version of rSNPBase

Variant report

Variant rs72707270
Chromosome Location chr1:178972659-178972660
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:178971600-178972800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr1:178971600-178973000 Enhancers HSMMtube muscle
3 chr1:178971600-178973600 Enhancers Stomach Mucosa stomach
4 chr1:178971600-178973800 Enhancers Primary B cells from peripheral blood blood
5 chr1:178971600-178974600 Enhancers Primary Natural Killer cells fromperipheralblood blood
6 chr1:178971800-178973200 Enhancers Liver Liver
7 chr1:178971800-178973200 Enhancers Duodenum Mucosa Duodenum
8 chr1:178971800-178973200 Enhancers Sigmoid Colon Sigmoid Colon
9 chr1:178971800-178973600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
10 chr1:178971800-178973600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
11 chr1:178971800-178973600 Enhancers Primary T helper cells PMA-I stimulated --
12 chr1:178971800-178973600 Enhancers Primary T helper 17 cells PMA-I stimulated --
13 chr1:178971800-178973600 Enhancers Primary T killer naive cells fromperipheralblood blood
14 chr1:178971800-178973600 Enhancers Fetal Intestine Large intestine
15 chr1:178971800-178973800 Enhancers Primary T helper naive cells from peripheral blood blood
16 chr1:178972000-178972800 Flanking Active TSS HepG2 liver
17 chr1:178972000-178973000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
18 chr1:178972000-178973200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
19 chr1:178972000-178973200 Enhancers Primary mononuclear cells fromperipheralblood Blood
20 chr1:178972000-178973600 Enhancers Primary T helper naive cells fromperipheralblood blood
21 chr1:178972000-178973600 Enhancers Primary T helper cells fromperipheralblood blood
22 chr1:178972000-178973800 Enhancers Primary T cells from cord blood blood
23 chr1:178972000-178974200 Enhancers Primary T killer memory cells from peripheral blood blood
24 chr1:178972200-178973200 Weak transcription Primary B cells from cord blood blood
25 chr1:178972200-178973200 Weak transcription Fetal Thymus thymus
26 chr1:178972200-178973400 Enhancers iPS-15b Cell Line embryonic stem cell
27 chr1:178972200-178973400 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr1:178972200-178973400 Enhancers Fetal Intestine Small intestine
29 chr1:178972200-178973400 Enhancers Rectal Mucosa Donor 31 rectum
30 chr1:178972200-178975200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr1:178972400-178972800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
32 chr1:178972400-178973200 Enhancers Colonic Mucosa Colon
33 chr1:178972400-178973400 Enhancers Rectal Mucosa Donor 29 rectum
34 chr1:178972400-178974600 Enhancers Primary T cells fromperipheralblood blood
35 chr1:178972400-178976600 Weak transcription A549 lung
36 chr1:178972400-178976600 Weak transcription Osteobl bone
37 chr1:178972400-178977800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr1:178972400-178986000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr1:178972600-178973000 Weak transcription K562 blood
40 chr1:178972600-178974200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
41 chr1:178972600-178976400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr1:178972600-178977800 Weak transcription Stomach Smooth Muscle stomach
43 chr1:178972600-178978000 Weak transcription Adipose Nuclei Adipose
44 chr1:178972600-178981200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015