The 2.0 version of rSNPBase

Variant report

Variant rs72709459
Chromosome Location chr1:179087145-179087146
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:179053200-179096000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr1:179059200-179096400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr1:179059400-179090400 Strong transcription HUVEC blood vessel
4 chr1:179061400-179090400 Strong transcription HSMM muscle
5 chr1:179062000-179088000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr1:179063200-179112000 Weak transcription Fetal Kidney kidney
7 chr1:179064800-179097800 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr1:179070400-179087200 Weak transcription Psoas Muscle Psoas
9 chr1:179071400-179090400 Strong transcription NHDF-Ad bronchial
10 chr1:179072000-179090400 Strong transcription Osteobl bone
11 chr1:179072200-179090000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr1:179074200-179088200 Strong transcription NHEK skin
13 chr1:179074200-179091000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr1:179074400-179088200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr1:179075200-179091200 Strong transcription NHLF lung
16 chr1:179075400-179091000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr1:179075400-179091400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr1:179075400-179096200 Strong transcription Breast Myoepithelial Primary Cells Breast
19 chr1:179075600-179089200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr1:179075800-179089600 Strong transcription Primary hematopoietic stem cells short term culture blood
21 chr1:179076000-179088200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr1:179076000-179090400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr1:179076200-179093400 Strong transcription Fetal Stomach stomach
24 chr1:179076400-179090400 Strong transcription Primary T helper cells PMA-I stimulated --
25 chr1:179076400-179090400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr1:179076600-179090000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr1:179076600-179092800 Strong transcription NH-A brain
28 chr1:179076800-179088000 Strong transcription Primary T helper cells fromperipheralblood blood
29 chr1:179077200-179090600 Strong transcription Muscle Satellite Cultured Cells --
30 chr1:179077400-179090200 Weak transcription GM12878-XiMat blood
31 chr1:179077600-179094000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr1:179077800-179091000 Strong transcription Adipose Nuclei Adipose
33 chr1:179078000-179091200 Strong transcription HSMMtube muscle
34 chr1:179078200-179090600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
35 chr1:179078600-179097600 Weak transcription Stomach Mucosa stomach
36 chr1:179079600-179109800 Weak transcription Small Intestine intestine
37 chr1:179080000-179087200 Weak transcription Rectal Smooth Muscle rectum
38 chr1:179080000-179087400 Weak transcription Placenta Amnion Placenta Amnion
39 chr1:179080000-179088000 Weak transcription iPS-15b Cell Line embryonic stem cell
40 chr1:179080000-179089000 Weak transcription ES-I3 Cell Line embryonic stem cell
41 chr1:179080000-179090400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr1:179080000-179090800 Weak transcription Fetal Heart heart
43 chr1:179080000-179090800 Weak transcription Pancreas Pancrea
44 chr1:179080000-179097800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
45 chr1:179080000-179097800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
46 chr1:179080000-179098600 Weak transcription Esophagus oesophagus
47 chr1:179080200-179095800 Weak transcription Pancreatic Islets Pancreatic Islet
48 chr1:179080200-179101600 Weak transcription Fetal Brain Male brain
49 chr1:179080400-179103800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
50 chr1:179080800-179098400 Weak transcription Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015