The 2.0 version of rSNPBase

Variant report

Variant rs72709462
Chromosome Location chr1:179103876-179103877
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:179063200-179112000 Weak transcription Fetal Kidney kidney
2 chr1:179079600-179109800 Weak transcription Small Intestine intestine
3 chr1:179086600-179105000 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr1:179087800-179113000 Weak transcription Placenta Amnion Placenta Amnion
5 chr1:179090800-179104400 Weak transcription Fetal Brain Female brain
6 chr1:179091000-179108800 Weak transcription H9 Cell Line embryonic stem cell
7 chr1:179091000-179109000 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr1:179091000-179109200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr1:179093400-179117200 Weak transcription Fetal Stomach stomach
10 chr1:179095800-179106800 Weak transcription Gastric stomach
11 chr1:179095800-179107400 Weak transcription H1 Cell Line embryonic stem cell
12 chr1:179096400-179108800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
13 chr1:179096600-179106800 Weak transcription Fetal Lung lung
14 chr1:179096600-179110200 Weak transcription Cortex derived primary cultured neurospheres brain
15 chr1:179098200-179112000 Weak transcription Lung lung
16 chr1:179099200-179110200 Weak transcription Primary hematopoietic stem cells blood
17 chr1:179099200-179110400 Weak transcription Brain Angular Gyrus brain
18 chr1:179099200-179110400 Weak transcription Brain Anterior Caudate brain
19 chr1:179099200-179114800 Weak transcription Brain Cingulate Gyrus brain
20 chr1:179099400-179106800 Weak transcription Pancreas Pancrea
21 chr1:179099400-179106800 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr1:179099400-179106800 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr1:179099400-179107000 Weak transcription Placenta Placenta
24 chr1:179099400-179110000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr1:179099400-179110400 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr1:179099400-179112000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr1:179099400-179112000 Weak transcription Left Ventricle heart
28 chr1:179099600-179106800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr1:179099600-179106800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr1:179099600-179109200 Weak transcription Primary T cells from cord blood blood
31 chr1:179099600-179109800 Weak transcription Primary monocytes fromperipheralblood blood
32 chr1:179099600-179109800 Weak transcription Primary T cells fromperipheralblood blood
33 chr1:179099600-179110000 Weak transcription Monocytes-CD14+_RO01746 blood
34 chr1:179099600-179110200 Weak transcription Primary B cells from peripheral blood blood
35 chr1:179099600-179110600 Weak transcription Rectal Smooth Muscle rectum
36 chr1:179099600-179110800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr1:179099600-179116800 Weak transcription Thymus Thymus
38 chr1:179099600-179119400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
39 chr1:179099600-179122600 Weak transcription Stomach Smooth Muscle stomach
40 chr1:179099800-179104000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
41 chr1:179099800-179106400 Weak transcription Hela-S3 cervix
42 chr1:179099800-179107000 Weak transcription Adipose Nuclei Adipose
43 chr1:179099800-179107000 Weak transcription Psoas Muscle Psoas
44 chr1:179099800-179108800 Weak transcription Primary T helper cells PMA-I stimulated --
45 chr1:179099800-179109400 Weak transcription Primary B cells from cord blood blood
46 chr1:179099800-179111800 Weak transcription HepG2 liver
47 chr1:179100000-179105200 Weak transcription iPS-18 Cell Line embryonic stem cell
48 chr1:179100000-179106000 Weak transcription HUES64 Cell Line embryonic stem cell
49 chr1:179100000-179108600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr1:179100000-179121000 Weak transcription Rectal Mucosa Donor 31 rectum

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Last update: Aug 31, 2015