The 2.0 version of rSNPBase

Variant report

Variant rs72709476
Chromosome Location chr1:179150556-179150557
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:33 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:179117800-179186000 Weak transcription Fetal Stomach stomach
2 chr1:179122000-179189400 Weak transcription Primary B cells from cord blood blood
3 chr1:179122400-179153000 Weak transcription Primary T cells from cord blood blood
4 chr1:179134000-179169000 Weak transcription Fetal Intestine Small intestine
5 chr1:179139400-179157200 Weak transcription K562 blood
6 chr1:179139400-179158800 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr1:179139400-179196800 Weak transcription Pancreas Pancrea
8 chr1:179144800-179159200 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr1:179145000-179158600 Weak transcription Primary hematopoietic stem cells short term culture blood
10 chr1:179145000-179159800 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr1:179145000-179159800 Weak transcription Brain Angular Gyrus brain
12 chr1:179145400-179159000 Weak transcription Right Ventricle heart
13 chr1:179146000-179150600 Enhancers HSMMtube muscle
14 chr1:179146200-179150800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr1:179146400-179150600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr1:179146800-179175600 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr1:179147200-179150800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr1:179147400-179150600 Enhancers HMEC breast
19 chr1:179147600-179160000 Weak transcription Primary B cells from peripheral blood blood
20 chr1:179147600-179174600 Weak transcription Psoas Muscle Psoas
21 chr1:179148000-179150800 Enhancers NHEK skin
22 chr1:179148000-179186000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr1:179148400-179185800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr1:179148800-179152000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr1:179148800-179156000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr1:179149200-179150800 Enhancers Breast Myoepithelial Primary Cells Breast
27 chr1:179149200-179157200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr1:179149600-179150800 Enhancers Brain Hippocampus Middle brain
29 chr1:179149600-179151400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr1:179149800-179150600 Weak transcription Ovary ovary
31 chr1:179149800-179157000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr1:179150000-179150600 Enhancers HSMM muscle
33 chr1:179150400-179150600 Enhancers Colon Smooth Muscle Colon

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Last update: Aug 31, 2015