The 2.0 version of rSNPBase

Variant report

Variant rs72709407
Chromosome Location chr1:179022128-179022129
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:178998400-179027400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr1:179003800-179025800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr1:179004200-179024200 Weak transcription Liver Liver
4 chr1:179004400-179024200 Weak transcription Fetal Kidney kidney
5 chr1:179004800-179024600 Weak transcription Primary B cells from cord blood blood
6 chr1:179006000-179024200 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr1:179006400-179024800 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr1:179006400-179032400 Weak transcription Esophagus oesophagus
9 chr1:179006800-179024200 Weak transcription Primary T regulatory cells fromperipheralblood blood
10 chr1:179007000-179024200 Weak transcription HUVEC blood vessel
11 chr1:179007600-179024200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
12 chr1:179008000-179033000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr1:179008400-179023600 Weak transcription iPS-20b Cell Line embryonic stem cell
14 chr1:179008400-179033000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr1:179008400-179041000 Weak transcription Small Intestine intestine
16 chr1:179008600-179022200 Weak transcription Brain Inferior Temporal Lobe brain
17 chr1:179008600-179022200 Weak transcription Brain Substantia Nigra brain
18 chr1:179008600-179022200 Weak transcription Stomach Mucosa stomach
19 chr1:179008600-179023600 Weak transcription Primary T helper naive cells fromperipheralblood blood
20 chr1:179008600-179023600 Weak transcription Primary T helper cells fromperipheralblood blood
21 chr1:179008600-179024200 Weak transcription Primary B cells from peripheral blood blood
22 chr1:179008600-179024400 Weak transcription Hela-S3 cervix
23 chr1:179008600-179033000 Weak transcription Brain Angular Gyrus brain
24 chr1:179008600-179035000 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr1:179008600-179049800 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr1:179008600-179049800 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr1:179008800-179024400 Weak transcription NHDF-Ad bronchial
28 chr1:179008800-179024800 Weak transcription HMEC breast
29 chr1:179009400-179033000 Weak transcription Gastric stomach
30 chr1:179009600-179050400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr1:179011200-179022200 Weak transcription Fetal Intestine Large intestine
32 chr1:179011600-179023600 Weak transcription Dnd41 blood
33 chr1:179011600-179025400 Weak transcription iPS-18 Cell Line embryonic stem cell
34 chr1:179011800-179024800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr1:179011800-179025200 Weak transcription HUES6 Cell Line embryonic stem cell
36 chr1:179012000-179022600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr1:179012000-179025200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
38 chr1:179012200-179024000 Weak transcription Cortex derived primary cultured neurospheres brain
39 chr1:179012200-179033000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr1:179012400-179025800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr1:179012600-179024200 Weak transcription Fetal Thymus thymus
42 chr1:179012600-179027600 Weak transcription Lung lung
43 chr1:179013000-179023800 Weak transcription Fetal Muscle Leg muscle
44 chr1:179013200-179023600 Weak transcription Fetal Muscle Trunk muscle
45 chr1:179013200-179027400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr1:179013200-179027400 Weak transcription H9 Cell Line embryonic stem cell
47 chr1:179013200-179032600 Weak transcription GM12878-XiMat blood
48 chr1:179013400-179025000 Weak transcription Fetal Lung lung
49 chr1:179013400-179030200 Weak transcription Fetal Intestine Small intestine
50 chr1:179013400-179030400 Weak transcription Fetal Stomach stomach

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Last update: Aug 31, 2015