The 2.0 version of rSNPBase

Variant report

Variant rs12327776
Chromosome Location chr19:41913140-41913141
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41904200-41913400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr19:41904600-41924800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr19:41904800-41913200 Weak transcription H9 Cell Line embryonic stem cell
4 chr19:41904800-41914800 Weak transcription Placenta Amnion Placenta Amnion
5 chr19:41905000-41915200 Weak transcription Muscle Satellite Cultured Cells --
6 chr19:41905000-41916000 Weak transcription Gastric stomach
7 chr19:41905000-41916400 Weak transcription Brain Germinal Matrix brain
8 chr19:41905000-41916600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
9 chr19:41905000-41916600 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr19:41905000-41924800 Weak transcription HUES48 Cell Line embryonic stem cell
11 chr19:41905000-41930800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr19:41905200-41913400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr19:41905200-41913400 Weak transcription NH-A brain
14 chr19:41905200-41914200 Weak transcription Colon Smooth Muscle Colon
15 chr19:41905200-41914400 Weak transcription Psoas Muscle Psoas
16 chr19:41905200-41914800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr19:41905200-41914800 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr19:41905200-41915000 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr19:41905200-41915000 Weak transcription HMEC breast
20 chr19:41905200-41915200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr19:41905200-41915200 Weak transcription HSMM muscle
22 chr19:41905200-41915200 Weak transcription NHEK skin
23 chr19:41905200-41915200 Weak transcription Osteobl bone
24 chr19:41905200-41916000 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr19:41905200-41916000 Weak transcription Primary T killer naive cells fromperipheralblood blood
26 chr19:41905200-41916600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr19:41905200-41916600 Weak transcription Fetal Thymus thymus
28 chr19:41905200-41916800 Weak transcription Aorta Aorta
29 chr19:41905200-41916800 Weak transcription Ovary ovary
30 chr19:41905200-41917000 Weak transcription Colonic Mucosa Colon
31 chr19:41905200-41917200 Weak transcription Fetal Lung lung
32 chr19:41905200-41917400 Weak transcription Brain Substantia Nigra brain
33 chr19:41905200-41917600 Weak transcription HSMMtube muscle
34 chr19:41905200-41926600 Weak transcription Small Intestine intestine
35 chr19:41905400-41914200 Weak transcription HepG2 liver
36 chr19:41905400-41915200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr19:41905400-41915200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr19:41905400-41915200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr19:41905400-41915200 Weak transcription A549 lung
40 chr19:41905400-41916400 Weak transcription Brain Cingulate Gyrus brain
41 chr19:41905400-41916600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr19:41905400-41917000 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr19:41906000-41916600 Weak transcription Dnd41 blood
44 chr19:41907600-41915400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr19:41907800-41915200 Weak transcription NHLF lung
46 chr19:41908200-41916600 Weak transcription Brain Inferior Temporal Lobe brain
47 chr19:41909200-41915800 Weak transcription Primary B cells from peripheral blood blood
48 chr19:41909400-41914200 Weak transcription Fetal Intestine Large intestine
49 chr19:41909400-41915200 Weak transcription Rectal Smooth Muscle rectum
50 chr19:41909600-41914800 Weak transcription Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015