The 2.0 version of rSNPBase

Variant report

Variant rs8102501
Chromosome Location chr19:41851186-41851187
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41818600-41854800 Strong transcription Dnd41 blood
2 chr19:41832400-41856000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr19:41834200-41856600 Weak transcription Brain Anterior Caudate brain
4 chr19:41834200-41856800 Weak transcription Fetal Kidney kidney
5 chr19:41834400-41854800 Weak transcription Small Intestine intestine
6 chr19:41834800-41855600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr19:41834800-41856800 Weak transcription Brain Cingulate Gyrus brain
8 chr19:41834800-41856800 Weak transcription Brain Substantia Nigra brain
9 chr19:41835000-41854400 Strong transcription Fetal Stomach stomach
10 chr19:41835000-41856600 Weak transcription Brain Inferior Temporal Lobe brain
11 chr19:41835000-41856800 Weak transcription Brain Angular Gyrus brain
12 chr19:41835600-41856000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr19:41836000-41855200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr19:41837800-41855800 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr19:41838600-41856600 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr19:41840400-41854600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr19:41840800-41855800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr19:41841800-41856600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr19:41842400-41851200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr19:41843400-41854600 Strong transcription HUVEC blood vessel
21 chr19:41843800-41852200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr19:41844000-41853800 Strong transcription Fetal Adrenal Gland Adrenal Gland
23 chr19:41844200-41854200 Strong transcription Thymus Thymus
24 chr19:41845200-41851200 Strong transcription HepG2 liver
25 chr19:41845800-41856000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr19:41846000-41851200 Genic enhancers Primary monocytes fromperipheralblood blood
27 chr19:41846400-41854400 Genic enhancers Primary T helper cells fromperipheralblood blood
28 chr19:41846400-41854800 Genic enhancers Primary T cells fromperipheralblood blood
29 chr19:41846400-41855000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr19:41846400-41855000 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
31 chr19:41846600-41851200 Genic enhancers Primary T helper cells PMA-I stimulated --
32 chr19:41846600-41854200 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr19:41846600-41854400 Genic enhancers Primary T helper memory cells from peripheral blood 1 blood
34 chr19:41846800-41852000 Genic enhancers Primary T cells effector/memory enriched fromperipheralblood blood
35 chr19:41846800-41854400 Strong transcription Stomach Smooth Muscle stomach
36 chr19:41846800-41854800 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
37 chr19:41847000-41851200 Strong transcription A549 lung
38 chr19:41847000-41855800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr19:41847400-41852400 Genic enhancers Primary T killer memory cells from peripheral blood blood
40 chr19:41847400-41853600 Genic enhancers Primary T helper memory cells from peripheral blood 2 blood
41 chr19:41847600-41851200 Strong transcription HUES6 Cell Line embryonic stem cell
42 chr19:41847600-41851200 Genic enhancers Primary T helper naive cells from peripheral blood blood
43 chr19:41847600-41851200 Strong transcription HSMMtube muscle
44 chr19:41847600-41853600 Strong transcription Placenta Amnion Placenta Amnion
45 chr19:41847600-41854400 Strong transcription Osteobl bone
46 chr19:41848000-41851400 Genic enhancers Primary T helper naive cells fromperipheralblood blood
47 chr19:41848200-41851200 Genic enhancers Primary neutrophils fromperipheralblood blood
48 chr19:41848200-41851200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr19:41848200-41851200 Strong transcription Lung lung
50 chr19:41848200-41851800 Weak transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015