The 2.0 version of rSNPBase

Variant report

Variant rs59204307
Chromosome Location chr19:41885837-41885838
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41871200-41888600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr19:41871400-41888400 Weak transcription Dnd41 blood
3 chr19:41880400-41894000 Weak transcription HSMMtube muscle
4 chr19:41882800-41886400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
5 chr19:41882800-41895400 Weak transcription Psoas Muscle Psoas
6 chr19:41882800-41895600 Weak transcription HSMM muscle
7 chr19:41883000-41886000 Weak transcription NH-A brain
8 chr19:41883000-41887600 Weak transcription Fetal Intestine Small intestine
9 chr19:41883000-41888000 Weak transcription A549 lung
10 chr19:41883000-41888400 Weak transcription Primary T cells from cord blood blood
11 chr19:41883000-41890400 Weak transcription Fetal Lung lung
12 chr19:41883000-41891200 Weak transcription Placenta Amnion Placenta Amnion
13 chr19:41883000-41891800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr19:41883000-41892600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr19:41883000-41895400 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr19:41883000-41895600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr19:41883000-41895600 Weak transcription Aorta Aorta
18 chr19:41883000-41896000 Weak transcription Small Intestine intestine
19 chr19:41883000-41896000 Weak transcription HUVEC blood vessel
20 chr19:41883000-41902800 Weak transcription Stomach Mucosa stomach
21 chr19:41883200-41886000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr19:41883200-41886000 Weak transcription Fetal Heart heart
23 chr19:41883200-41888000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr19:41883200-41888000 Weak transcription Brain Cingulate Gyrus brain
25 chr19:41883200-41888400 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr19:41883200-41888400 Weak transcription Left Ventricle heart
27 chr19:41883200-41888600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr19:41883200-41888600 Weak transcription Brain Angular Gyrus brain
29 chr19:41883200-41888600 Weak transcription Brain Inferior Temporal Lobe brain
30 chr19:41883200-41888600 Weak transcription Fetal Intestine Large intestine
31 chr19:41883200-41888600 Weak transcription Ovary ovary
32 chr19:41883200-41889600 Weak transcription Gastric stomach
33 chr19:41883200-41890400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr19:41883200-41890400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr19:41883200-41891200 Weak transcription Liver Liver
36 chr19:41883200-41891200 Weak transcription Placenta Placenta
37 chr19:41883200-41891800 Weak transcription Pancreas Pancrea
38 chr19:41883200-41891800 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr19:41883200-41892000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
40 chr19:41883200-41892200 Weak transcription Duodenum Mucosa Duodenum
41 chr19:41883200-41892600 Weak transcription NHLF lung
42 chr19:41883200-41892800 Weak transcription Brain Substantia Nigra brain
43 chr19:41883200-41892800 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr19:41883200-41893200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
45 chr19:41883200-41893800 Weak transcription Esophagus oesophagus
46 chr19:41883200-41894000 Weak transcription H9 Cell Line embryonic stem cell
47 chr19:41883200-41894200 Weak transcription Rectal Smooth Muscle rectum
48 chr19:41883200-41895400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr19:41883200-41895400 Weak transcription Right Ventricle heart
50 chr19:41883200-41895600 Weak transcription Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015