The 2.0 version of rSNPBase

Variant report

Variant rs8106999
Chromosome Location chr19:41875573-41875574
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41870600-41882000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr19:41870800-41882000 Weak transcription H9 Cell Line embryonic stem cell
3 chr19:41871000-41876600 Weak transcription Fetal Kidney kidney
4 chr19:41871000-41879800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr19:41871000-41879800 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr19:41871000-41880000 Weak transcription HSMMtube muscle
7 chr19:41871000-41881800 Weak transcription Primary T helper cells fromperipheralblood blood
8 chr19:41871000-41882000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr19:41871000-41882000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr19:41871000-41882000 Weak transcription Primary T cells from cord blood blood
11 chr19:41871200-41876200 Enhancers Primary monocytes fromperipheralblood blood
12 chr19:41871200-41878400 Weak transcription Brain Germinal Matrix brain
13 chr19:41871200-41879000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr19:41871200-41879200 Weak transcription Cortex derived primary cultured neurospheres brain
15 chr19:41871200-41879600 Weak transcription Fetal Muscle Trunk muscle
16 chr19:41871200-41879600 Weak transcription Right Atrium heart
17 chr19:41871200-41879600 Weak transcription Stomach Smooth Muscle stomach
18 chr19:41871200-41879800 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr19:41871200-41879800 Weak transcription Brain Anterior Caudate brain
20 chr19:41871200-41879800 Weak transcription Brain Cingulate Gyrus brain
21 chr19:41871200-41879800 Weak transcription Brain Inferior Temporal Lobe brain
22 chr19:41871200-41879800 Weak transcription Fetal Lung lung
23 chr19:41871200-41879800 Weak transcription Left Ventricle heart
24 chr19:41871200-41879800 Weak transcription Right Ventricle heart
25 chr19:41871200-41879800 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr19:41871200-41879800 Weak transcription Skeletal Muscle Female skeletal muscle
27 chr19:41871200-41880000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr19:41871200-41881800 Weak transcription Primary T cells fromperipheralblood blood
29 chr19:41871200-41882000 Weak transcription HUES48 Cell Line embryonic stem cell
30 chr19:41871200-41882000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
31 chr19:41871200-41882000 Weak transcription Thymus Thymus
32 chr19:41871200-41882200 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr19:41871200-41884000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr19:41871200-41888600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr19:41871400-41882000 Weak transcription Liver Liver
36 chr19:41871400-41888400 Weak transcription Dnd41 blood
37 chr19:41871600-41875600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
38 chr19:41872200-41875600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr19:41872400-41879600 Weak transcription Fetal Muscle Leg muscle
40 chr19:41872400-41880000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr19:41872600-41881600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
42 chr19:41872600-41882200 Weak transcription Fetal Thymus thymus
43 chr19:41873000-41879800 Weak transcription Lung lung
44 chr19:41873800-41882000 Weak transcription Spleen Spleen
45 chr19:41874200-41879800 Weak transcription Adipose Nuclei Adipose
46 chr19:41874200-41879800 Weak transcription Duodenum Mucosa Duodenum
47 chr19:41874200-41879800 Weak transcription Gastric stomach
48 chr19:41874200-41879800 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr19:41874200-41881800 Weak transcription Primary B cells from peripheral blood blood
50 chr19:41874200-41881800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015