The 2.0 version of rSNPBase

Variant report

Variant rs59777247
Chromosome Location chr19:41907481-41907482
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41904200-41913400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr19:41904600-41924800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr19:41904800-41913200 Weak transcription H9 Cell Line embryonic stem cell
4 chr19:41904800-41914800 Weak transcription Placenta Amnion Placenta Amnion
5 chr19:41905000-41912800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr19:41905000-41912800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr19:41905000-41915200 Weak transcription Muscle Satellite Cultured Cells --
8 chr19:41905000-41916000 Weak transcription Gastric stomach
9 chr19:41905000-41916400 Weak transcription Brain Germinal Matrix brain
10 chr19:41905000-41916600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
11 chr19:41905000-41916600 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr19:41905000-41924800 Weak transcription HUES48 Cell Line embryonic stem cell
13 chr19:41905000-41930800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
14 chr19:41905200-41907600 Weak transcription Brain Hippocampus Middle brain
15 chr19:41905200-41907800 Weak transcription Primary B cells from cord blood blood
16 chr19:41905200-41907800 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr19:41905200-41908400 Weak transcription Primary T cells fromperipheralblood blood
18 chr19:41905200-41908400 Weak transcription Right Ventricle heart
19 chr19:41905200-41908800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr19:41905200-41908800 Weak transcription Duodenum Mucosa Duodenum
21 chr19:41905200-41908800 Weak transcription Thymus Thymus
22 chr19:41905200-41909000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr19:41905200-41909000 Weak transcription Pancreas Pancrea
24 chr19:41905200-41911800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr19:41905200-41912800 Weak transcription Brain Anterior Caudate brain
26 chr19:41905200-41912800 Weak transcription Fetal Heart heart
27 chr19:41905200-41913000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr19:41905200-41913000 Weak transcription Brain Angular Gyrus brain
29 chr19:41905200-41913000 Weak transcription Stomach Mucosa stomach
30 chr19:41905200-41913400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr19:41905200-41913400 Weak transcription NH-A brain
32 chr19:41905200-41914200 Weak transcription Colon Smooth Muscle Colon
33 chr19:41905200-41914400 Weak transcription Psoas Muscle Psoas
34 chr19:41905200-41914800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr19:41905200-41914800 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr19:41905200-41915000 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr19:41905200-41915000 Weak transcription HMEC breast
38 chr19:41905200-41915200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr19:41905200-41915200 Weak transcription HSMM muscle
40 chr19:41905200-41915200 Weak transcription NHEK skin
41 chr19:41905200-41915200 Weak transcription Osteobl bone
42 chr19:41905200-41916000 Weak transcription Primary T helper naive cells from peripheral blood blood
43 chr19:41905200-41916000 Weak transcription Primary T killer naive cells fromperipheralblood blood
44 chr19:41905200-41916600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
45 chr19:41905200-41916600 Weak transcription Fetal Thymus thymus
46 chr19:41905200-41916800 Weak transcription Aorta Aorta
47 chr19:41905200-41916800 Weak transcription Ovary ovary
48 chr19:41905200-41917000 Weak transcription Colonic Mucosa Colon
49 chr19:41905200-41917200 Weak transcription Fetal Lung lung
50 chr19:41905200-41917400 Weak transcription Brain Substantia Nigra brain

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Last update: Aug 31, 2015