The 2.0 version of rSNPBase

Variant report

Variant rs73931479
Chromosome Location chr19:41916988-41916989
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41904600-41924800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr19:41905000-41924800 Weak transcription HUES48 Cell Line embryonic stem cell
3 chr19:41905000-41930800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr19:41905200-41917000 Weak transcription Colonic Mucosa Colon
5 chr19:41905200-41917200 Weak transcription Fetal Lung lung
6 chr19:41905200-41917400 Weak transcription Brain Substantia Nigra brain
7 chr19:41905200-41917600 Weak transcription HSMMtube muscle
8 chr19:41905200-41926600 Weak transcription Small Intestine intestine
9 chr19:41905400-41917000 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr19:41913600-41917200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr19:41913600-41925800 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr19:41913800-41917000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr19:41913800-41917000 Weak transcription iPS-18 Cell Line embryonic stem cell
14 chr19:41913800-41917800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr19:41913800-41919400 Weak transcription H9 Cell Line embryonic stem cell
16 chr19:41913800-41919600 Weak transcription H1 Cell Line embryonic stem cell
17 chr19:41913800-41921000 Weak transcription HUES64 Cell Line embryonic stem cell
18 chr19:41913800-41927000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr19:41913800-41932600 Weak transcription iPS-20b Cell Line embryonic stem cell
20 chr19:41914000-41917800 Enhancers Stomach Mucosa stomach
21 chr19:41914200-41917200 Enhancers Primary B cells from cord blood blood
22 chr19:41914400-41917800 Enhancers Skeletal Muscle Female skeletal muscle
23 chr19:41914400-41918200 Enhancers Breast Myoepithelial Primary Cells Breast
24 chr19:41914400-41918200 Enhancers Fetal Heart heart
25 chr19:41914600-41918800 Strong transcription Fetal Muscle Trunk muscle
26 chr19:41914800-41918200 Enhancers Right Atrium heart
27 chr19:41915000-41918200 Enhancers HMEC breast
28 chr19:41915200-41918800 Weak transcription Fetal Brain Male brain
29 chr19:41915200-41932600 Weak transcription Pancreatic Islets Pancreatic Islet
30 chr19:41915400-41918200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
31 chr19:41915400-41932800 Weak transcription Hela-S3 cervix
32 chr19:41915600-41917000 Weak transcription Placenta Amnion Placenta Amnion
33 chr19:41915600-41917400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr19:41915600-41932800 Weak transcription NH-A brain
35 chr19:41915800-41917600 Weak transcription NHEK skin
36 chr19:41915800-41918200 Enhancers Right Ventricle heart
37 chr19:41915800-41920200 Weak transcription A549 lung
38 chr19:41916000-41917400 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
39 chr19:41916000-41918400 Enhancers Psoas Muscle Psoas
40 chr19:41916000-41919000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr19:41916000-41924200 Strong transcription Fetal Adrenal Gland Adrenal Gland
42 chr19:41916000-41932000 Strong transcription Fetal Stomach stomach
43 chr19:41916000-41932400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr19:41916200-41917000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr19:41916200-41917200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr19:41916200-41917600 Weak transcription Muscle Satellite Cultured Cells --
47 chr19:41916200-41917800 Weak transcription Rectal Mucosa Donor 31 rectum
48 chr19:41916200-41919000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr19:41916200-41919600 Strong transcription Fetal Intestine Small intestine
50 chr19:41916200-41921600 Strong transcription NHLF lung

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Last update: Aug 31, 2015