The 2.0 version of rSNPBase

Variant report

Variant rs9973242
Chromosome Location chr19:41878479-41878480
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41870600-41882000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr19:41870800-41882000 Weak transcription H9 Cell Line embryonic stem cell
3 chr19:41871000-41879800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr19:41871000-41879800 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr19:41871000-41880000 Weak transcription HSMMtube muscle
6 chr19:41871000-41881800 Weak transcription Primary T helper cells fromperipheralblood blood
7 chr19:41871000-41882000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr19:41871000-41882000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr19:41871000-41882000 Weak transcription Primary T cells from cord blood blood
10 chr19:41871200-41879000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr19:41871200-41879200 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr19:41871200-41879600 Weak transcription Fetal Muscle Trunk muscle
13 chr19:41871200-41879600 Weak transcription Right Atrium heart
14 chr19:41871200-41879600 Weak transcription Stomach Smooth Muscle stomach
15 chr19:41871200-41879800 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr19:41871200-41879800 Weak transcription Brain Anterior Caudate brain
17 chr19:41871200-41879800 Weak transcription Brain Cingulate Gyrus brain
18 chr19:41871200-41879800 Weak transcription Brain Inferior Temporal Lobe brain
19 chr19:41871200-41879800 Weak transcription Fetal Lung lung
20 chr19:41871200-41879800 Weak transcription Left Ventricle heart
21 chr19:41871200-41879800 Weak transcription Right Ventricle heart
22 chr19:41871200-41879800 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr19:41871200-41879800 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr19:41871200-41880000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr19:41871200-41881800 Weak transcription Primary T cells fromperipheralblood blood
26 chr19:41871200-41882000 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr19:41871200-41882000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
28 chr19:41871200-41882000 Weak transcription Thymus Thymus
29 chr19:41871200-41882200 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr19:41871200-41884000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr19:41871200-41888600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr19:41871400-41882000 Weak transcription Liver Liver
33 chr19:41871400-41888400 Weak transcription Dnd41 blood
34 chr19:41872400-41879600 Weak transcription Fetal Muscle Leg muscle
35 chr19:41872400-41880000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
36 chr19:41872600-41881600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
37 chr19:41872600-41882200 Weak transcription Fetal Thymus thymus
38 chr19:41873000-41879800 Weak transcription Lung lung
39 chr19:41873800-41882000 Weak transcription Spleen Spleen
40 chr19:41874200-41879800 Weak transcription Adipose Nuclei Adipose
41 chr19:41874200-41879800 Weak transcription Duodenum Mucosa Duodenum
42 chr19:41874200-41879800 Weak transcription Gastric stomach
43 chr19:41874200-41879800 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr19:41874200-41881800 Weak transcription Primary B cells from peripheral blood blood
45 chr19:41874200-41881800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr19:41874200-41882000 Weak transcription Stomach Mucosa stomach
47 chr19:41874200-41882200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr19:41874400-41878600 Enhancers Primary neutrophils fromperipheralblood blood
49 chr19:41874400-41879800 Weak transcription Muscle Satellite Cultured Cells --
50 chr19:41874400-41882200 Weak transcription Small Intestine intestine

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Last update: Aug 31, 2015