The 2.0 version of rSNPBase

Variant report

Variant rs73931466
Chromosome Location chr19:41863994-41863995
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41859800-41868200 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr19:41860200-41864000 Weak transcription Small Intestine intestine
3 chr19:41860200-41864800 Enhancers Primary monocytes fromperipheralblood blood
4 chr19:41860200-41865000 Enhancers Primary Natural Killer cells fromperipheralblood blood
5 chr19:41860200-41869000 Weak transcription Gastric stomach
6 chr19:41860400-41864400 Enhancers Primary mononuclear cells fromperipheralblood Blood
7 chr19:41860400-41864800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
8 chr19:41860400-41865800 Enhancers Primary T cells fromperipheralblood blood
9 chr19:41860400-41868200 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr19:41860400-41868600 Weak transcription GM12878-XiMat blood
11 chr19:41860400-41868800 Weak transcription Hela-S3 cervix
12 chr19:41860400-41869000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr19:41860400-41869000 Weak transcription Brain Angular Gyrus brain
14 chr19:41860400-41869000 Weak transcription Rectal Smooth Muscle rectum
15 chr19:41860400-41869200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr19:41860400-41869200 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr19:41860400-41869200 Weak transcription HSMMtube muscle
18 chr19:41860400-41869200 Weak transcription HUVEC blood vessel
19 chr19:41860400-41869200 Weak transcription NHDF-Ad bronchial
20 chr19:41860400-41869200 Weak transcription NHLF lung
21 chr19:41860400-41869400 Weak transcription Aorta Aorta
22 chr19:41860400-41869400 Weak transcription Ovary ovary
23 chr19:41860600-41864600 Enhancers Primary hematopoietic stem cells blood
24 chr19:41860600-41864600 Enhancers Primary hematopoietic stem cells short term culture blood
25 chr19:41860600-41864800 Enhancers Fetal Thymus thymus
26 chr19:41860600-41866800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr19:41860600-41866800 Weak transcription A549 lung
28 chr19:41860600-41868200 Weak transcription Fetal Intestine Small intestine
29 chr19:41860600-41868200 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr19:41860600-41868400 Weak transcription Duodenum Mucosa Duodenum
31 chr19:41860600-41868600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr19:41860600-41868800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr19:41860600-41869000 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr19:41860600-41869200 Weak transcription Muscle Satellite Cultured Cells --
35 chr19:41860600-41869200 Weak transcription Brain Substantia Nigra brain
36 chr19:41860600-41869200 Weak transcription Esophagus oesophagus
37 chr19:41860600-41869200 Weak transcription Osteobl bone
38 chr19:41860800-41868600 Weak transcription Pancreas Pancrea
39 chr19:41860800-41869200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr19:41860800-41869200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr19:41860800-41869200 Weak transcription Placenta Amnion Placenta Amnion
42 chr19:41860800-41869200 Weak transcription Right Ventricle heart
43 chr19:41861000-41868400 Weak transcription Dnd41 blood
44 chr19:41861000-41868600 Weak transcription Fetal Brain Female brain
45 chr19:41861000-41869200 Weak transcription Liver Liver
46 chr19:41861200-41869200 Weak transcription Fetal Kidney kidney
47 chr19:41861400-41869000 Weak transcription Breast Myoepithelial Primary Cells Breast
48 chr19:41861600-41868400 Weak transcription K562 blood
49 chr19:41861600-41868800 Weak transcription Stomach Smooth Muscle stomach
50 chr19:41862000-41866800 Weak transcription Fetal Stomach stomach

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Last update: Aug 31, 2015