The 2.0 version of rSNPBase

Variant report

Variant rs73931477
Chromosome Location chr19:41912208-41912209
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41904200-41913400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr19:41904600-41924800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr19:41904800-41913200 Weak transcription H9 Cell Line embryonic stem cell
4 chr19:41904800-41914800 Weak transcription Placenta Amnion Placenta Amnion
5 chr19:41905000-41912800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr19:41905000-41912800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr19:41905000-41915200 Weak transcription Muscle Satellite Cultured Cells --
8 chr19:41905000-41916000 Weak transcription Gastric stomach
9 chr19:41905000-41916400 Weak transcription Brain Germinal Matrix brain
10 chr19:41905000-41916600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
11 chr19:41905000-41916600 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr19:41905000-41924800 Weak transcription HUES48 Cell Line embryonic stem cell
13 chr19:41905000-41930800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
14 chr19:41905200-41912800 Weak transcription Brain Anterior Caudate brain
15 chr19:41905200-41912800 Weak transcription Fetal Heart heart
16 chr19:41905200-41913000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr19:41905200-41913000 Weak transcription Brain Angular Gyrus brain
18 chr19:41905200-41913000 Weak transcription Stomach Mucosa stomach
19 chr19:41905200-41913400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr19:41905200-41913400 Weak transcription NH-A brain
21 chr19:41905200-41914200 Weak transcription Colon Smooth Muscle Colon
22 chr19:41905200-41914400 Weak transcription Psoas Muscle Psoas
23 chr19:41905200-41914800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr19:41905200-41914800 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr19:41905200-41915000 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr19:41905200-41915000 Weak transcription HMEC breast
27 chr19:41905200-41915200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr19:41905200-41915200 Weak transcription HSMM muscle
29 chr19:41905200-41915200 Weak transcription NHEK skin
30 chr19:41905200-41915200 Weak transcription Osteobl bone
31 chr19:41905200-41916000 Weak transcription Primary T helper naive cells from peripheral blood blood
32 chr19:41905200-41916000 Weak transcription Primary T killer naive cells fromperipheralblood blood
33 chr19:41905200-41916600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr19:41905200-41916600 Weak transcription Fetal Thymus thymus
35 chr19:41905200-41916800 Weak transcription Aorta Aorta
36 chr19:41905200-41916800 Weak transcription Ovary ovary
37 chr19:41905200-41917000 Weak transcription Colonic Mucosa Colon
38 chr19:41905200-41917200 Weak transcription Fetal Lung lung
39 chr19:41905200-41917400 Weak transcription Brain Substantia Nigra brain
40 chr19:41905200-41917600 Weak transcription HSMMtube muscle
41 chr19:41905200-41926600 Weak transcription Small Intestine intestine
42 chr19:41905400-41914200 Weak transcription HepG2 liver
43 chr19:41905400-41915200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr19:41905400-41915200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr19:41905400-41915200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr19:41905400-41915200 Weak transcription A549 lung
47 chr19:41905400-41916400 Weak transcription Brain Cingulate Gyrus brain
48 chr19:41905400-41916600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr19:41905400-41917000 Weak transcription Cortex derived primary cultured neurospheres brain
50 chr19:41906000-41916600 Weak transcription Dnd41 blood

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Last update: Aug 31, 2015