Variant report
| Variant | rs1800471 |
|---|---|
| Chromosome Location | chr19:41858876-41858877 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr19:41855000-41859400 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 2 | chr19:41856000-41860400 | Active TSS | Osteobl | bone |
| 3 | chr19:41856400-41859000 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 4 | chr19:41856400-41859600 | Transcr. at gene 5' and 3' | Primary T regulatory cells fromperipheralblood | blood |
| 5 | chr19:41856400-41859600 | Flanking Active TSS | Primary mononuclear cells fromperipheralblood | Blood |
| 6 | chr19:41856400-41860200 | Active TSS | NH-A | brain |
| 7 | chr19:41856600-41859200 | Flanking Active TSS | Primary B cells from cord blood | blood |
| 8 | chr19:41856600-41859600 | Bivalent/Poised TSS | HUES48 Cell Line | embryonic stem cell |
| 9 | chr19:41856600-41859600 | Flanking Bivalent TSS/Enh | Fetal Adrenal Gland | Adrenal Gland |
| 10 | chr19:41856600-41859600 | Flanking Bivalent TSS/Enh | Skeletal Muscle Male | skeletal muscle |
| 11 | chr19:41856600-41859800 | Active TSS | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 12 | chr19:41856600-41859800 | Flanking Active TSS | Primary hematopoietic stem cells | blood |
| 13 | chr19:41856600-41859800 | Flanking Bivalent TSS/Enh | Colonic Mucosa | Colon |
| 14 | chr19:41856600-41860000 | Active TSS | Rectal Smooth Muscle | rectum |
| 15 | chr19:41856600-41860200 | Active TSS | HUVEC | blood vessel |
| 16 | chr19:41856600-41860400 | Active TSS | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 17 | chr19:41856600-41860400 | Active TSS | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 18 | chr19:41856800-41859400 | Flanking Active TSS | Ganglion Eminence derived primary cultured neurospheres | brain |
| 19 | chr19:41856800-41859400 | Flanking Bivalent TSS/Enh | Adipose Nuclei | Adipose |
| 20 | chr19:41856800-41859400 | Flanking Bivalent TSS/Enh | Skeletal Muscle Female | skeletal muscle |
| 21 | chr19:41856800-41859600 | Transcr. at gene 5' and 3' | Primary T helper naive cells fromperipheralblood | blood |
| 22 | chr19:41856800-41859600 | Transcr. at gene 5' and 3' | Primary T helper 17 cells PMA-I stimulated | -- |
| 23 | chr19:41856800-41859600 | Flanking Bivalent TSS/Enh | Cortex derived primary cultured neurospheres | brain |
| 24 | chr19:41856800-41859600 | Flanking Bivalent TSS/Enh | Fetal Muscle Leg | muscle |
| 25 | chr19:41856800-41860000 | Active TSS | Primary T helper memory cells from peripheral blood 2 | blood |
| 26 | chr19:41856800-41860000 | Active TSS | Muscle Satellite Cultured Cells | -- |
| 27 | chr19:41856800-41860200 | Active TSS | ES-WA7 Cell Line | embryonic stem cell |
| 28 | chr19:41856800-41860200 | Active TSS | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 29 | chr19:41856800-41860200 | Active TSS | HSMMtube | muscle |
| 30 | chr19:41856800-41860400 | Active TSS | Aorta | Aorta |
| 31 | chr19:41856800-41860400 | Active TSS | Ovary | ovary |
| 32 | chr19:41857000-41859000 | Active TSS | Psoas Muscle | Psoas |
| 33 | chr19:41857000-41859200 | Bivalent/Poised TSS | ES-I3 Cell Line | embryonic stem cell |
| 34 | chr19:41857000-41859400 | Flanking Bivalent TSS/Enh | ES-UCSF4 Cell Line | embryonic stem cell |
| 35 | chr19:41857000-41859400 | Flanking Active TSS | Pancreas | Pancrea |
| 36 | chr19:41857000-41859600 | Flanking Bivalent TSS/Enh | Brain Germinal Matrix | brain |
| 37 | chr19:41857000-41859600 | Flanking Bivalent TSS/Enh | Fetal Muscle Trunk | muscle |
| 38 | chr19:41857000-41859800 | Active TSS | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 39 | chr19:41857000-41859800 | Flanking Bivalent TSS/Enh | Fetal Brain Female | brain |
| 40 | chr19:41857000-41860000 | Active TSS | Primary T helper naive cells from peripheral blood | blood |
| 41 | chr19:41857000-41860000 | Active TSS | Primary T helper memory cells from peripheral blood 1 | blood |
| 42 | chr19:41857000-41860000 | Active TSS | Primary T helper cells PMA-I stimulated | -- |
| 43 | chr19:41857000-41860200 | Active TSS | Small Intestine | intestine |
| 44 | chr19:41857000-41860400 | Active TSS | Pancreatic Islets | Pancreatic Islet |
| 45 | chr19:41857200-41859200 | Bivalent/Poised TSS | H9 Cell Line | embryonic stem cell |
| 46 | chr19:41857200-41859200 | Bivalent/Poised TSS | HUES6 Cell Line | embryonic stem cell |
| 47 | chr19:41857200-41859200 | Bivalent/Poised TSS | iPS-15b Cell Line | embryonic stem cell |
| 48 | chr19:41857200-41859600 | Bivalent/Poised TSS | HUES64 Cell Line | embryonic stem cell |
| 49 | chr19:41857200-41859800 | Flanking Bivalent TSS/Enh | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 50 | chr19:41857200-41859800 | Flanking Active TSS | Liver | Liver |
