Variant report

Variant rs12526680
Chromosome Location chr6:26550954-26550955
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:26539600-26553000 Weak transcription Fetal Heart heart
2 chr6:26549600-26551800 Active TSS iPS-15b Cell Line embryonic stem cell
3 chr6:26549800-26551400 Active TSS H9 Cell Line embryonic stem cell
4 chr6:26550000-26551200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
5 chr6:26550000-26551200 Enhancers Stomach Mucosa stomach
6 chr6:26550000-26551400 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr6:26550000-26551400 Active TSS Fetal Kidney kidney
8 chr6:26550000-26551400 Flanking Active TSS Dnd41 blood
9 chr6:26550000-26551600 Active TSS iPS-18 Cell Line embryonic stem cell
10 chr6:26550000-26551800 Active TSS HUES48 Cell Line embryonic stem cell
11 chr6:26550000-26552000 Active TSS ES-I3 Cell Line embryonic stem cell
12 chr6:26550200-26551200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr6:26550200-26551200 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
14 chr6:26550200-26551200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr6:26550200-26551200 Active TSS Brain Anterior Caudate brain
16 chr6:26550200-26551200 Flanking Active TSS Fetal Muscle Trunk muscle
17 chr6:26550200-26551200 Active TSS HSMMtube muscle
18 chr6:26550200-26551400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr6:26550200-26551400 Active TSS Primary T cells from cord blood blood
20 chr6:26550200-26551400 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr6:26550200-26551400 Active TSS Fetal Brain Female brain
22 chr6:26550200-26551400 Active TSS Thymus Thymus
23 chr6:26550200-26551600 Active TSS H1 Cell Line embryonic stem cell
24 chr6:26550200-26551600 Active TSS HUES6 Cell Line embryonic stem cell
25 chr6:26550200-26552000 Active TSS iPS-20b Cell Line embryonic stem cell
26 chr6:26550400-26551000 Flanking Active TSS GM12878-XiMat blood
27 chr6:26550400-26551200 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
28 chr6:26550400-26551200 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr6:26550400-26551200 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
30 chr6:26550400-26551200 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
31 chr6:26550400-26551200 Active TSS Breast Myoepithelial Primary Cells Breast
32 chr6:26550400-26551200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
33 chr6:26550400-26551200 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
34 chr6:26550400-26551200 Active TSS Muscle Satellite Cultured Cells --
35 chr6:26550400-26551200 Active TSS Cortex derived primary cultured neurospheres brain
36 chr6:26550400-26551200 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
37 chr6:26550400-26551200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
38 chr6:26550400-26551200 Active TSS Colonic Mucosa Colon
39 chr6:26550400-26551200 Bivalent/Poised TSS Fetal Brain Male brain
40 chr6:26550400-26551200 Active TSS Fetal Lung lung
41 chr6:26550400-26551200 Flanking Active TSS Fetal Muscle Leg muscle
42 chr6:26550400-26551200 Active TSS Fetal Stomach stomach
43 chr6:26550400-26551200 Active TSS Left Ventricle heart
44 chr6:26550400-26551200 Active TSS Ovary ovary
45 chr6:26550400-26551200 Active TSS Right Ventricle heart
46 chr6:26550400-26551200 Active TSS HSMM muscle
47 chr6:26550400-26551200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
48 chr6:26550400-26551400 Active TSS ES-WA7 Cell Line embryonic stem cell
49 chr6:26550400-26551400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
50 chr6:26550400-26551400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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