Variant report

Variant	rs4713006
Chromosome Location	chr6:26519872-26519873
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:10)
CpG islands
(count:0)
Chromatin interactive
region (count:16)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:10 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	HEY1	chr6:26519458-26519966	K562	blood:	n/a	n/a
2	TAF7	chr6:26519561-26519984	K562	blood:	n/a	n/a
3	TBP	chr6:26519867-26519949	K562	blood:	n/a	n/a
4	POLR2A	chr6:26519495-26519935	K562	blood:	n/a	n/a
5	POLR2A	chr6:26519530-26520008	K562	blood:	n/a	n/a
6	TAF7	chr6:26519692-26519885	K562	blood:	n/a	n/a
7	ZMIZ1	chr6:26519788-26519921	K562	blood:	n/a	n/a
8	GTF2B	chr6:26519746-26519997	K562	blood:	n/a	n/a
9	GTF2F1	chr6:26519861-26519961	K562	blood:	n/a	n/a
10	POLR2A	chr6:26519560-26519982	K562	blood:	n/a	n/a

No data

(count:16 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:26420252..26422779-chr6:26519711..26522673,2	K562	blood:
2	chr6:26517743..26520869-chr6:26521157..26524450,4	MCF-7	breast:
3	chr6:26157128..26159753-chr6:26519202..26521718,3	K562	blood:
4	chr6:26195075..26199998-chr6:26518402..26523264,7	K562	blood:
5	chr6:26518768..26523261-chr6:26527138..26531427,8	MCF-7	breast:
6	chr6:26321606..26324992-chr6:26518176..26520933,3	K562	blood:
7	chr6:26352176..26356420-chr6:26519489..26524545,4	K562	blood:
8	chr6:26248591..26251636-chr6:26519454..26522320,3	K562	blood:
9	chr6:26519250..26523737-chr6:27099178..27105777,8	K562	blood:
10	chr6:26457960..26461047-chr6:26519488..26522400,3	MCF-7	breast:
11	chr6:26420245..26422646-chr6:26519763..26522632,2	K562	blood:
12	chr6:26215412..26219085-chr6:26518224..26524021,6	K562	blood:
13	chr6:26122246..26124996-chr6:26519353..26522732,3	K562	blood:
14	chr6:26187760..26190799-chr6:26518890..26523308,5	K562	blood:
15	chr6:26284286..26286997-chr6:26519588..26522057,2	K562	blood:
16	chr6:26283829..26285786-chr6:26519588..26522507,3	K562	blood:

No data

Variant related genes	Relation type
RNU6-502P	TF binding region
HCG11	TF binding region
ENSG00000180596	Chromatin interaction
ENSG00000124635	Chromatin interaction
ENSG00000228223	Chromatin interaction
ENSG00000187990	Chromatin interaction
ENSG00000220875	Chromatin interaction
ENSG00000196866	Chromatin interaction
ENSG00000256316	Chromatin interaction
ENSG00000197409	Chromatin interaction
ENSG00000180573	Chromatin interaction
ENSG00000168274	Chromatin interaction
ENSG00000112763	Chromatin interaction
ENSG00000261353	Chromatin interaction
ENSG00000216331	Chromatin interaction
ENSG00000158406	Chromatin interaction
ENSG00000197846	Chromatin interaction
ENSG00000188987	Chromatin interaction
ENSG00000124549	Chromatin interaction
ENSG00000158373	Chromatin interaction
ENSG00000252399	Chromatin interaction
ENSG00000196787	Chromatin interaction

Extended variants
information (count: 139 )
Associated
traits (count: 6 )

rSNPs within LD-proxies of this variant (count:134)

rs_ID	r²[population]
rs1001687	0.90[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs1021372	0.93[YRI][hapmap]
rs10214634	0.94[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs10223789	0.90[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs10223792	0.87[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs1027204	0.93[YRI][hapmap]
rs10484442	1.00[CEU][hapmap];0.96[YRI][hapmap];0.95[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs1056347	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1056667	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1056668	0.93[EUR][1000 genomes]
rs1078679	1.00[CEU][hapmap];0.96[YRI][hapmap];0.93[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs10946834	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10946835	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10946837	0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11752946	0.83[EUR][1000 genomes]
rs11754138	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11756120	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12526680	1.00[CEU][hapmap];0.86[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs12663883	0.90[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs12663894	0.90[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs12665431	0.89[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs1321479	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.96[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1321480	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1321481	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1321482	1.00[CEU][hapmap];0.96[YRI][hapmap];0.90[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs1535274	0.81[AMR][1000 genomes]
rs1535276	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1535277	0.87[AFR][1000 genomes]
rs1570059	1.00[CEU][hapmap];0.90[YRI][hapmap];0.90[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs1570060	1.00[CEU][hapmap];0.97[YRI][hapmap];0.90[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs1570061	1.00[CEU][hapmap];0.96[YRI][hapmap];0.90[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs1884946	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1884947	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs1884948	0.88[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs1884949	0.93[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs1977201	0.90[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs2024970	0.83[EUR][1000 genomes]
rs2208331	0.95[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2224380	1.00[CEU][hapmap];0.96[YRI][hapmap];0.96[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs2255070	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.95[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2393669	0.91[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2393670	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2451741	0.93[YRI][hapmap]
rs2494692	0.93[YRI][hapmap]
rs2494701	0.93[YRI][hapmap]
rs2498380	0.93[YRI][hapmap]
rs2504565	0.89[YRI][hapmap]
rs2504566	0.90[YRI][hapmap]
rs2504567	0.89[YRI][hapmap]
rs2504571	0.89[YRI][hapmap]
rs2504599	0.96[YRI][hapmap]
rs2504600	0.89[YRI][hapmap]
rs28558133	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs35355150	0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3736781	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.95[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3736782	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.95[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3757151	0.94[AFR][1000 genomes];0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3800303	0.93[YRI][hapmap]
rs4343916	0.81[AMR][1000 genomes]
rs4368798	0.89[YRI][hapmap];0.80[AFR][1000 genomes]
rs4573	0.96[CEU][hapmap];0.84[CHB][hapmap];0.86[EUR][1000 genomes]
rs4713008	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4871	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs55930917	0.84[EUR][1000 genomes]
rs6456733	1.00[CEU][hapmap];0.93[YRI][hapmap];0.91[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs6456734	0.96[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs6456735	0.96[CEU][hapmap];0.93[YRI][hapmap];0.89[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs6903973	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.95[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6909277	0.81[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs6910899	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6910930	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6913398	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6913462	0.90[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs6913877	0.90[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs6918360	1.00[CEU][hapmap];0.93[YRI][hapmap];0.90[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs6918506	1.00[CEU][hapmap];0.97[YRI][hapmap];0.90[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs6918854	1.00[CEU][hapmap];0.96[YRI][hapmap];0.90[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs6922824	1.00[CEU][hapmap];0.93[YRI][hapmap];0.94[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs6924838	0.91[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs6924865	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6925047	0.81[AMR][1000 genomes]
rs6925703	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6925783	0.87[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs6925895	1.00[CEU][hapmap];0.96[YRI][hapmap];0.91[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs6926629	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.95[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6930120	1.00[CEU][hapmap];0.90[YRI][hapmap];0.95[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs6932156	0.91[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs6932350	0.82[EUR][1000 genomes]
rs6932865	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6933176	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6940053	0.98[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs6940188	0.98[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs6941022	1.00[CEU][hapmap];0.96[YRI][hapmap];0.96[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs767471	1.00[CEU][hapmap];0.96[YRI][hapmap];0.96[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs7753565	1.00[CEU][hapmap];1.00[YRI][hapmap]
rs7767847	0.89[YRI][hapmap]
rs9295694	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9295695	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9295698	0.94[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs9357010	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9358952	0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9358954	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9379887	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9393728	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9393729	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9393731	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9393732	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9461259	0.95[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9461267	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9461270	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9461271	1.00[CEU][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs9461272	1.00[CEU][hapmap];0.93[YRI][hapmap];0.89[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs9461275	0.80[AFR][1000 genomes]
rs9467773	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9467774	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9467775	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9467776	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9467778	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9467779	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9467782	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9467783	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9467784	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9467787	0.94[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs9467788	0.90[YRI][hapmap]
rs9467791	1.00[CEU][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs9467796	0.91[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs9467797	0.93[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs9467798	1.00[CEU][hapmap];0.97[YRI][hapmap];0.89[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs9467799	0.87[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs9467800	1.00[CEU][hapmap];0.97[YRI][hapmap];0.90[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs9467802	0.90[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs9467805	0.81[AFR][1000 genomes]
rs9467810	0.89[YRI][hapmap]
rs9986382	1.00[CEU][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1029920	chr6:25638507-26585842	Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Active TSS Genic enhancers Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1215 gene(s)	inside rSNPs	diseases
2	nsv538162	chr6:25638507-26585842	Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Weak transcription Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1215 gene(s)	inside rSNPs	diseases
3	nsv1023453	chr6:25853830-26528250	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1201 gene(s)	inside rSNPs	diseases
4	nsv482836	chr6:26352883-26520964	Enhancers Flanking Active TSS Strong transcription Active TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
5	nsv482407	chr6:26369320-26550148	Active TSS Strong transcription Flanking Active TSS Weak transcription Genic enhancers ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	62 gene(s)	inside rSNPs	diseases

mRNA abundance (count:6)

SNP	Gene	Cis/trans	Tissue	Source
rs4713006	HCG11	cis	normal skin	skin_eQTL
rs4713006	HCG11	cis	uninvolved skin	skin_eQTL
rs4713006	ZNF322	cis	Nerve Tibial	GTEx
rs4713006	HMGN4	cis	Whole Blood	GTEx
rs4713006	HCG11	Cis_1M	lymphoblastoid	RTeQTL
rs4713006	HMGN4	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:26505600-26520600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr6:26514200-26520400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr6:26515600-26520400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr6:26516000-26520400	Weak transcription	Fetal Intestine Large	intestine
5	chr6:26516000-26520400	Weak transcription	Fetal Intestine Small	intestine
6	chr6:26516200-26520600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr6:26517200-26520600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr6:26517800-26520400	Weak transcription	A549	lung
9	chr6:26518200-26520200	Weak transcription	HepG2	liver
10	chr6:26519000-26520400	Enhancers	K562	blood
11	chr6:26519000-26520600	Weak transcription	Fetal Muscle Trunk	muscle
12	chr6:26519200-26520200	Weak transcription	GM12878-XiMat	blood
13	chr6:26519800-26520400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin

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