Variant report

Variant rs6933176
Chromosome Location chr6:26540178-26540179
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:26536400-26540400 Active TSS HUES64 Cell Line embryonic stem cell
2 chr6:26537000-26540200 Active TSS A549 lung
3 chr6:26537200-26540200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr6:26537400-26540200 Active TSS Fetal Kidney kidney
5 chr6:26537600-26540400 Active TSS Rectal Mucosa Donor 29 rectum
6 chr6:26537800-26540200 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
7 chr6:26538800-26540400 Flanking Active TSS Primary T helper cells fromperipheralblood blood
8 chr6:26539000-26540200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr6:26539000-26540400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr6:26539200-26540200 Flanking Active TSS Dnd41 blood
11 chr6:26539200-26540200 Flanking Active TSS NHEK skin
12 chr6:26539200-26540400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
13 chr6:26539200-26545400 Weak transcription Gastric stomach
14 chr6:26539200-26550600 Weak transcription Placenta Amnion Placenta Amnion
15 chr6:26539400-26540400 Enhancers Primary Natural Killer cells fromperipheralblood blood
16 chr6:26539400-26540600 Enhancers Primary B cells from peripheral blood blood
17 chr6:26539400-26540600 Enhancers Sigmoid Colon Sigmoid Colon
18 chr6:26539400-26540600 Enhancers Small Intestine intestine
19 chr6:26539400-26542800 Weak transcription Liver Liver
20 chr6:26539400-26546000 Weak transcription Ovary ovary
21 chr6:26539400-26550600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr6:26539600-26540200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr6:26539600-26540200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr6:26539600-26540200 Enhancers Primary B cells from cord blood blood
25 chr6:26539600-26540200 Enhancers Brain Cingulate Gyrus brain
26 chr6:26539600-26540200 Enhancers Colonic Mucosa Colon
27 chr6:26539600-26540200 Enhancers Duodenum Smooth Muscle Duodenum
28 chr6:26539600-26540200 Enhancers Fetal Intestine Small intestine
29 chr6:26539600-26540200 Enhancers Thymus Thymus
30 chr6:26539600-26540200 Enhancers Monocytes-CD14+_RO01746 blood
31 chr6:26539600-26540400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr6:26539600-26540400 Enhancers Primary mononuclear cells fromperipheralblood Blood
33 chr6:26539600-26540400 Weak transcription Adipose Nuclei Adipose
34 chr6:26539600-26540400 Enhancers Fetal Intestine Large intestine
35 chr6:26539600-26540400 Genic enhancers Fetal Stomach stomach
36 chr6:26539600-26540400 Enhancers Right Ventricle heart
37 chr6:26539600-26540400 Enhancers Osteobl bone
38 chr6:26539600-26540600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr6:26539600-26540600 Enhancers Brain Hippocampus Middle brain
40 chr6:26539600-26540600 Enhancers Colon Smooth Muscle Colon
41 chr6:26539600-26540600 Enhancers Fetal Brain Male brain
42 chr6:26539600-26540800 Weak transcription Aorta Aorta
43 chr6:26539600-26541200 Enhancers Primary T helper naive cells from peripheral blood blood
44 chr6:26539600-26541400 Enhancers Primary T killer memory cells from peripheral blood blood
45 chr6:26539600-26541800 Enhancers Primary T helper 17 cells PMA-I stimulated --
46 chr6:26539600-26542000 Weak transcription NH-A brain
47 chr6:26539600-26542200 Enhancers Primary T helper naive cells fromperipheralblood blood
48 chr6:26539600-26542400 Weak transcription Cortex derived primary cultured neurospheres brain
49 chr6:26539600-26542600 Weak transcription Primary neutrophils fromperipheralblood blood
50 chr6:26539600-26542800 Enhancers Primary T helper memory cells from peripheral blood 1 blood

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