Variant report

Variant	rs13116918
Chromosome Location	chr4:128130753-128130754
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 80 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:80)

rs_ID	r²[population]
rs1000707	0.92[ASN][1000 genomes]
rs10012435	0.92[ASN][1000 genomes]
rs10019793	0.96[EUR][1000 genomes]
rs10020400	0.88[EUR][1000 genomes]
rs10023594	0.82[EUR][1000 genomes]
rs10518518	0.92[ASN][1000 genomes]
rs11098914	0.92[ASN][1000 genomes]
rs11098915	0.92[ASN][1000 genomes]
rs11098916	0.89[ASN][1000 genomes]
rs11098917	0.92[ASN][1000 genomes]
rs11722995	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11731344	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11934978	0.94[EUR][1000 genomes]
rs12498324	0.96[EUR][1000 genomes]
rs12507297	0.96[EUR][1000 genomes]
rs12647820	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12647867	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13124828	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13145752	0.94[EUR][1000 genomes]
rs1443061	0.87[EUR][1000 genomes]
rs1443064	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1443065	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1443066	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1550626	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1596282	0.81[EUR][1000 genomes]
rs17228715	0.92[ASN][1000 genomes]
rs17228756	0.92[ASN][1000 genomes]
rs17228875	0.92[ASN][1000 genomes]
rs17229246	0.92[ASN][1000 genomes]
rs17229576	0.91[ASN][1000 genomes]
rs17291337	1.00[JPT][hapmap]
rs17294432	0.92[ASN][1000 genomes]
rs17294586	0.92[ASN][1000 genomes]
rs17294663	0.92[ASN][1000 genomes]
rs17295431	0.87[ASN][1000 genomes]
rs1992516	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2218321	0.81[EUR][1000 genomes]
rs28524825	0.92[ASN][1000 genomes]
rs4240281	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4550943	0.92[ASN][1000 genomes]
rs4574426	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4574427	0.95[EUR][1000 genomes]
rs4833373	0.87[EUR][1000 genomes]
rs4834186	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4997057	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs55773382	0.92[ASN][1000 genomes]
rs56216620	0.92[ASN][1000 genomes]
rs56387802	0.92[ASN][1000 genomes]
rs62333900	0.92[ASN][1000 genomes]
rs62333901	0.92[ASN][1000 genomes]
rs62333902	0.92[ASN][1000 genomes]
rs62333903	0.92[ASN][1000 genomes]
rs62333904	0.92[ASN][1000 genomes]
rs62333905	0.92[ASN][1000 genomes]
rs62333906	0.92[ASN][1000 genomes]
rs62333907	0.92[ASN][1000 genomes]
rs62333908	0.92[ASN][1000 genomes]
rs62335164	0.91[ASN][1000 genomes]
rs6810678	0.92[ASN][1000 genomes]
rs6820610	0.96[EUR][1000 genomes]
rs6836252	0.89[ASN][1000 genomes]
rs6836483	0.92[ASN][1000 genomes]
rs6853523	0.92[ASN][1000 genomes]
rs6857872	0.92[ASN][1000 genomes]
rs6857937	0.92[ASN][1000 genomes]
rs6858838	0.92[ASN][1000 genomes]
rs72680022	0.92[ASN][1000 genomes]
rs744559	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7655646	0.89[ASN][1000 genomes]
rs7666038	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7666301	0.82[EUR][1000 genomes]
rs7687004	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9284641	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs967532	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs967533	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs998857	0.92[ASN][1000 genomes]
rs998858	0.92[ASN][1000 genomes]
rs999285	0.92[ASN][1000 genomes]
rs9997843	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9999648	0.96[CEU][hapmap];0.90[CHB][hapmap];0.85[EUR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:128126000-128133400	Weak transcription	HUES48 Cell Line	embryonic stem cell
2	chr4:128126200-128131600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr4:128126200-128131600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr4:128130400-128130800	Enhancers	Ovary	ovary
5	chr4:128130600-128132400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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