Variant report

Variant	rs17294586
Chromosome Location	chr4:128135027-128135028
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:128134410..128136138-chr4:128138981..128141973,2	K562	blood:

Extended variants
information (count: 84 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:84)

rs_ID	r²[population]
rs1000707	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10012435	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10518518	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11098914	0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11098915	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11098916	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11098917	0.84[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11722995	0.92[ASN][1000 genomes]
rs11731344	0.92[ASN][1000 genomes]
rs12647820	0.94[ASN][1000 genomes]
rs12647867	0.92[ASN][1000 genomes]
rs13116918	0.92[ASN][1000 genomes]
rs13124828	0.92[ASN][1000 genomes]
rs1351425	0.87[EUR][1000 genomes]
rs1351426	0.88[EUR][1000 genomes]
rs1383520	0.85[EUR][1000 genomes]
rs1443064	0.85[ASN][1000 genomes]
rs1443065	0.91[ASN][1000 genomes]
rs1443066	0.91[ASN][1000 genomes]
rs1480897	0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1480909	0.86[EUR][1000 genomes]
rs1480910	0.85[EUR][1000 genomes]
rs1550626	0.91[ASN][1000 genomes]
rs17228715	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17228756	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17228875	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17229246	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17229576	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17291337	0.96[CEU][hapmap];1.00[JPT][hapmap]
rs17293310	0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs17293345	0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs17293359	0.90[EUR][1000 genomes]
rs17294432	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17294663	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17295431	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1992516	0.91[ASN][1000 genomes]
rs28524825	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4240281	0.91[ASN][1000 genomes]
rs4550943	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4550946	0.88[EUR][1000 genomes]
rs4574426	0.96[ASN][1000 genomes]
rs4834186	0.91[ASN][1000 genomes]
rs4997057	0.91[ASN][1000 genomes]
rs55773382	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55824976	0.86[EUR][1000 genomes]
rs56216620	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56387802	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62333871	0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs62333879	0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs62333900	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62333901	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62333902	0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62333903	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62333904	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62333905	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62333906	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62333907	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62333908	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62335164	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs62335523	0.86[EUR][1000 genomes]
rs62335528	0.88[EUR][1000 genomes]
rs6810678	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6836252	0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6836483	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6853523	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6857872	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6857937	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6858838	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72680008	0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72680022	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs744559	0.93[ASN][1000 genomes]
rs7655646	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7666038	0.92[ASN][1000 genomes]
rs7687004	0.82[ASN][1000 genomes]
rs7694318	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9284641	0.92[ASN][1000 genomes]
rs967532	0.91[ASN][1000 genomes]
rs967533	0.91[ASN][1000 genomes]
rs976814	0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs998857	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs998858	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs999285	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9997843	0.96[ASN][1000 genomes]
rs9999648	0.81[CHB][hapmap]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:128131400-128135600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr4:128131600-128136200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr4:128132200-128135200	Weak transcription	Fetal Muscle Leg	muscle
4	chr4:128132200-128135200	Weak transcription	Fetal Stomach	stomach
5	chr4:128132200-128135200	Weak transcription	Right Atrium	heart
6	chr4:128132400-128135400	Weak transcription	Stomach Smooth Muscle	stomach
7	chr4:128133200-128138000	Weak transcription	Sigmoid Colon	Sigmoid Colon
8	chr4:128133800-128135600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr4:128134000-128135200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
10	chr4:128134000-128135200	Weak transcription	NHDF-Ad	bronchial
11	chr4:128134000-128135400	Weak transcription	Ovary	ovary
12	chr4:128134200-128135400	Weak transcription	Osteobl	bone
13	chr4:128135000-128135200	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr4:128135000-128135200	Enhancers	Fetal Kidney	kidney
15	chr4:128135000-128135400	Enhancers	Aorta	Aorta
16	chr4:128135000-128135400	Enhancers	Skeletal Muscle Male	skeletal muscle
17	chr4:128135000-128135800	Enhancers	Adipose Nuclei	Adipose
18	chr4:128135000-128135800	Enhancers	Fetal Lung	lung

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