Variant report

Variant	rs7655646
Chromosome Location	chr4:128157883-128157884
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:128156891..128158963-chr4:128159166..128161627,2	K562	blood:

Extended variants
information (count: 91 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:90)

rs_ID	r²[population]
rs1000707	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10012435	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10518518	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11098914	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11098915	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11098916	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11098917	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11722995	0.96[ASN][1000 genomes]
rs11731344	0.96[ASN][1000 genomes]
rs12647820	0.94[ASN][1000 genomes]
rs12647867	0.96[ASN][1000 genomes]
rs13116918	0.89[ASN][1000 genomes]
rs13124828	0.96[ASN][1000 genomes]
rs1351425	0.83[EUR][1000 genomes]
rs1351426	0.84[EUR][1000 genomes]
rs1383520	0.81[EUR][1000 genomes]
rs1443064	0.89[ASN][1000 genomes]
rs1443065	0.94[ASN][1000 genomes]
rs1443066	0.94[ASN][1000 genomes]
rs1480897	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1480909	0.82[EUR][1000 genomes]
rs1480910	0.81[EUR][1000 genomes]
rs1550626	0.94[ASN][1000 genomes]
rs1584019	0.82[EUR][1000 genomes]
rs17228715	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17228756	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17228875	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17229246	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17229576	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17291337	0.96[CEU][hapmap];1.00[JPT][hapmap]
rs17293310	0.86[EUR][1000 genomes]
rs17293345	0.86[EUR][1000 genomes]
rs17293359	0.86[EUR][1000 genomes]
rs17294432	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17294586	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17294663	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17295431	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1899547	0.81[ASN][1000 genomes]
rs1992516	0.94[ASN][1000 genomes]
rs2120088	0.82[ASN][1000 genomes]
rs28524825	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4240281	0.94[ASN][1000 genomes]
rs4306972	0.82[ASN][1000 genomes]
rs4435756	0.82[ASN][1000 genomes]
rs4550943	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4550946	0.84[EUR][1000 genomes]
rs4574426	0.93[ASN][1000 genomes]
rs4834186	0.94[ASN][1000 genomes]
rs4997057	0.94[ASN][1000 genomes]
rs55773382	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs55824976	0.83[EUR][1000 genomes]
rs56216620	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs56387802	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62333871	0.86[EUR][1000 genomes]
rs62333879	0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs62333900	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62333901	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62333902	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62333903	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62333904	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62333905	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62333906	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62333907	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62333908	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62335164	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs62335523	0.82[EUR][1000 genomes]
rs62335528	0.84[EUR][1000 genomes]
rs6810678	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6836252	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6836483	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6853523	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6857872	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6857937	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6858838	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs72680008	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72680022	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs744559	0.89[ASN][1000 genomes]
rs7666038	0.96[ASN][1000 genomes]
rs7687004	0.85[ASN][1000 genomes]
rs7694318	0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs894532	0.82[ASN][1000 genomes]
rs9284641	0.96[ASN][1000 genomes]
rs967532	0.94[ASN][1000 genomes]
rs967533	0.94[ASN][1000 genomes]
rs976814	0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs998857	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs998858	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs999285	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9997843	0.93[ASN][1000 genomes]
rs9999648	0.81[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1031024	chr4:128152969-128264539	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:128151600-128160400	Weak transcription	Fetal Stomach	stomach
2	chr4:128157600-128162000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr4:128157800-128159200	Enhancers	NHDF-Ad	bronchial
4	chr4:128157800-128160400	Enhancers	Fetal Lung	lung

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