The 2.0 version of rSNPBase

Variant report

Variant rs13155194
Chromosome Location chr5:16469415-16469416
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:16466800-16470200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr5:16466800-16471000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr5:16466800-16477400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr5:16467000-16476600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr5:16467200-16470000 Weak transcription iPS-20b Cell Line embryonic stem cell
6 chr5:16467400-16470400 Enhancers Fetal Brain Female brain
7 chr5:16467400-16478000 Weak transcription Fetal Muscle Trunk muscle
8 chr5:16467600-16479200 Weak transcription Primary B cells from cord blood blood
9 chr5:16468000-16477000 Weak transcription Primary hematopoietic stem cells blood
10 chr5:16468000-16481800 Weak transcription Fetal Thymus thymus
11 chr5:16468200-16469600 Weak transcription Fetal Muscle Leg muscle
12 chr5:16468200-16469600 Weak transcription Gastric stomach
13 chr5:16468200-16469600 Weak transcription Left Ventricle heart
14 chr5:16468200-16469600 Weak transcription Pancreas Pancrea
15 chr5:16468200-16469800 Weak transcription Fetal Brain Male brain
16 chr5:16468200-16470400 Enhancers Skeletal Muscle Female skeletal muscle
17 chr5:16468200-16470400 Weak transcription Hela-S3 cervix
18 chr5:16468200-16470800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr5:16468200-16471000 Enhancers Skeletal Muscle Male skeletal muscle
20 chr5:16468200-16471000 Weak transcription Stomach Mucosa stomach
21 chr5:16468200-16471400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr5:16468200-16472200 Weak transcription Osteobl bone
23 chr5:16468200-16474000 Weak transcription Liver Liver
24 chr5:16468200-16474800 Weak transcription Primary T cells from cord blood blood
25 chr5:16468200-16474800 Weak transcription Primary T helper cells fromperipheralblood blood
26 chr5:16468200-16474800 Weak transcription Primary T regulatory cells fromperipheralblood blood
27 chr5:16468200-16474800 Weak transcription Thymus Thymus
28 chr5:16468200-16475000 Weak transcription Duodenum Mucosa Duodenum
29 chr5:16468200-16475000 Weak transcription Esophagus oesophagus
30 chr5:16468200-16475000 Weak transcription Fetal Intestine Large intestine
31 chr5:16468200-16475000 Weak transcription Lung lung
32 chr5:16468200-16475400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
33 chr5:16468200-16476200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr5:16468200-16476400 Weak transcription Ovary ovary
35 chr5:16468200-16476800 Weak transcription Brain Substantia Nigra brain
36 chr5:16468200-16477800 Weak transcription Brain Anterior Caudate brain
37 chr5:16468200-16480200 Weak transcription Primary T helper naive cells from peripheral blood blood
38 chr5:16468200-16480600 Weak transcription Fetal Intestine Small intestine
39 chr5:16468200-16481000 Weak transcription Brain Hippocampus Middle brain
40 chr5:16468200-16481600 Weak transcription Primary T killer memory cells from peripheral blood blood
41 chr5:16468200-16482000 Weak transcription Primary T cells fromperipheralblood blood
42 chr5:16468200-16483200 Weak transcription A549 lung
43 chr5:16468200-16483400 Weak transcription Rectal Mucosa Donor 29 rectum
44 chr5:16468200-16484000 Weak transcription Small Intestine intestine
45 chr5:16468200-16485000 Weak transcription Primary T helper naive cells fromperipheralblood blood
46 chr5:16468200-16487400 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr5:16468200-16489600 Weak transcription Brain Cingulate Gyrus brain
48 chr5:16468200-16490800 Weak transcription Right Ventricle heart
49 chr5:16468400-16470800 Weak transcription Rectal Mucosa Donor 31 rectum
50 chr5:16468400-16471400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015