Variant report

Variant rs16902829
Chromosome Location chr5:36223585-36223586
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:36172000-36229200 Weak transcription Colonic Mucosa Colon
2 chr5:36179000-36230000 Weak transcription Psoas Muscle Psoas
3 chr5:36190600-36227400 Weak transcription Thymus Thymus
4 chr5:36191800-36230000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr5:36192000-36224200 Weak transcription Aorta Aorta
6 chr5:36192600-36227800 Weak transcription HUES6 Cell Line embryonic stem cell
7 chr5:36196600-36236600 Weak transcription GM12878-XiMat blood
8 chr5:36197800-36224800 Weak transcription HUES48 Cell Line embryonic stem cell
9 chr5:36198000-36238400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr5:36200000-36229600 Weak transcription Primary T killer naive cells fromperipheralblood blood
11 chr5:36200200-36239400 Weak transcription Fetal Brain Male brain
12 chr5:36201200-36230200 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr5:36201400-36240000 Weak transcription Primary T helper naive cells from peripheral blood blood
14 chr5:36203800-36227000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr5:36204000-36227000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr5:36205200-36226800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr5:36210600-36225000 Weak transcription NHEK skin
18 chr5:36210600-36225200 Weak transcription Muscle Satellite Cultured Cells --
19 chr5:36212400-36226800 Strong transcription Rectal Mucosa Donor 29 rectum
20 chr5:36213200-36224800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr5:36213200-36225000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr5:36213200-36230200 Weak transcription Brain Germinal Matrix brain
23 chr5:36213200-36237000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr5:36213400-36227600 Weak transcription NH-A brain
25 chr5:36214800-36226200 Strong transcription Primary T cells fromperipheralblood blood
26 chr5:36215200-36236600 Weak transcription Small Intestine intestine
27 chr5:36215800-36237800 Weak transcription HMEC breast
28 chr5:36216400-36225800 Weak transcription iPS-20b Cell Line embryonic stem cell
29 chr5:36216800-36228400 Weak transcription HUVEC blood vessel
30 chr5:36219000-36226600 Strong transcription Skeletal Muscle Female skeletal muscle
31 chr5:36219000-36227000 Strong transcription HepG2 liver
32 chr5:36219200-36226600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr5:36219200-36226800 Strong transcription Adipose Nuclei Adipose
34 chr5:36219400-36226000 Strong transcription Fetal Adrenal Gland Adrenal Gland
35 chr5:36219400-36226600 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
36 chr5:36219600-36230000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr5:36219800-36227000 Strong transcription Cortex derived primary cultured neurospheres brain
38 chr5:36220200-36223800 Weak transcription Placenta Placenta
39 chr5:36220200-36226600 Strong transcription Brain Anterior Caudate brain
40 chr5:36220400-36226000 Strong transcription Brain Cingulate Gyrus brain
41 chr5:36220400-36226200 Strong transcription Primary hematopoietic stem cells short term culture blood
42 chr5:36220600-36225000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr5:36220600-36225000 Weak transcription Primary T helper cells PMA-I stimulated --
44 chr5:36220600-36226600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr5:36220800-36225000 Weak transcription HUES64 Cell Line embryonic stem cell
46 chr5:36220800-36226200 Strong transcription Primary T cells from cord blood blood
47 chr5:36221000-36226600 Strong transcription Liver Liver
48 chr5:36221000-36230200 Weak transcription K562 blood
49 chr5:36221200-36224200 Weak transcription Brain Angular Gyrus brain
50 chr5:36221200-36230000 Weak transcription HSMMtube muscle

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