The 2.0 version of rSNPBase

Variant report

Variant rs57472443
Chromosome Location chr5:36186532-36186533
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:36154400-36210800 Weak transcription Small Intestine intestine
2 chr5:36163800-36200600 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr5:36164800-36220800 Weak transcription Gastric stomach
4 chr5:36169200-36193200 Weak transcription Pancreas Pancrea
5 chr5:36169600-36202400 Weak transcription Fetal Heart heart
6 chr5:36171800-36220600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr5:36172000-36229200 Weak transcription Colonic Mucosa Colon
8 chr5:36172400-36189400 Weak transcription Fetal Intestine Small intestine
9 chr5:36172400-36189600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr5:36174200-36195200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
11 chr5:36174400-36190800 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr5:36175000-36189600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr5:36175000-36191200 Weak transcription Aorta Aorta
14 chr5:36175000-36191600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr5:36175200-36189600 Weak transcription Spleen Spleen
16 chr5:36175200-36202400 Weak transcription Right Ventricle heart
17 chr5:36175200-36220800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr5:36175400-36189600 Weak transcription Lung lung
19 chr5:36175400-36190600 Weak transcription Ovary ovary
20 chr5:36175600-36195800 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr5:36175600-36222400 Weak transcription Rectal Smooth Muscle rectum
22 chr5:36179000-36189400 Weak transcription Thymus Thymus
23 chr5:36179000-36189600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr5:36179000-36189600 Weak transcription Fetal Stomach stomach
25 chr5:36179000-36222800 Weak transcription H9 Cell Line embryonic stem cell
26 chr5:36179000-36230000 Weak transcription Psoas Muscle Psoas
27 chr5:36179200-36199800 Weak transcription Colon Smooth Muscle Colon
28 chr5:36179200-36210400 Weak transcription Fetal Kidney kidney
29 chr5:36179200-36212600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr5:36180400-36194800 Weak transcription Stomach Smooth Muscle stomach
31 chr5:36180800-36197400 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr5:36181200-36195000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr5:36181200-36202600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr5:36181400-36200600 Weak transcription NHEK skin
35 chr5:36181400-36212800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
36 chr5:36181800-36190200 Weak transcription Brain Inferior Temporal Lobe brain
37 chr5:36181800-36195000 Weak transcription Primary T cells fromperipheralblood blood
38 chr5:36181800-36195000 Weak transcription Muscle Satellite Cultured Cells --
39 chr5:36182000-36190600 Weak transcription Fetal Lung lung
40 chr5:36182200-36188800 Weak transcription Primary hematopoietic stem cells blood
41 chr5:36182200-36189600 Weak transcription Primary B cells from peripheral blood blood
42 chr5:36182200-36190400 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr5:36182200-36190600 Weak transcription Duodenum Mucosa Duodenum
44 chr5:36182200-36190800 Weak transcription Fetal Brain Male brain
45 chr5:36182200-36191600 Weak transcription Primary B cells from cord blood blood
46 chr5:36182200-36192600 Weak transcription NHDF-Ad bronchial
47 chr5:36182200-36195000 Weak transcription HMEC breast
48 chr5:36182200-36195200 Weak transcription K562 blood
49 chr5:36182200-36195400 Weak transcription NHLF lung
50 chr5:36182200-36200800 Weak transcription Primary T helper naive cells from peripheral blood blood

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Last update: Aug 31, 2015