Variant report

Variant rs16953992
Chromosome Location chr16:47269958-47269959
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:47178800-47296600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr16:47230000-47332600 Weak transcription Thymus Thymus
3 chr16:47231800-47298600 Weak transcription Right Ventricle heart
4 chr16:47232400-47291200 Weak transcription GM12878-XiMat blood
5 chr16:47233200-47273400 Weak transcription Small Intestine intestine
6 chr16:47236200-47291600 Weak transcription Rectal Smooth Muscle rectum
7 chr16:47239000-47270200 Weak transcription Brain Substantia Nigra brain
8 chr16:47245200-47291600 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr16:47245400-47294400 Weak transcription Pancreas Pancrea
10 chr16:47246200-47291000 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr16:47246800-47298600 Weak transcription Brain Angular Gyrus brain
12 chr16:47247200-47299000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr16:47247600-47290000 Weak transcription Esophagus oesophagus
14 chr16:47248000-47290600 Weak transcription HepG2 liver
15 chr16:47250400-47291400 Weak transcription Primary T cells fromperipheralblood blood
16 chr16:47250400-47296600 Weak transcription Lung lung
17 chr16:47251200-47289600 Weak transcription Duodenum Mucosa Duodenum
18 chr16:47251400-47274400 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr16:47251400-47281400 Weak transcription Brain Inferior Temporal Lobe brain
20 chr16:47251600-47272400 Weak transcription Fetal Kidney kidney
21 chr16:47251600-47272800 Weak transcription Placenta Amnion Placenta Amnion
22 chr16:47251600-47281200 Weak transcription Brain Hippocampus Middle brain
23 chr16:47251600-47291000 Weak transcription HSMM muscle
24 chr16:47251800-47272800 Weak transcription Brain Germinal Matrix brain
25 chr16:47252000-47291800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
26 chr16:47252200-47270800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr16:47252200-47271800 Weak transcription Hela-S3 cervix
28 chr16:47252200-47281400 Weak transcription Dnd41 blood
29 chr16:47252200-47291200 Weak transcription Primary neutrophils fromperipheralblood blood
30 chr16:47252400-47270400 Weak transcription Primary monocytes fromperipheralblood blood
31 chr16:47252800-47281400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr16:47252800-47291000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr16:47252800-47291400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr16:47253000-47290800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr16:47253200-47291000 Weak transcription Primary T regulatory cells fromperipheralblood blood
36 chr16:47253200-47294400 Weak transcription Colon Smooth Muscle Colon
37 chr16:47253400-47294800 Weak transcription Psoas Muscle Psoas
38 chr16:47253800-47270600 Weak transcription Primary T helper cells PMA-I stimulated --
39 chr16:47255000-47270600 Weak transcription Duodenum Smooth Muscle Duodenum
40 chr16:47255200-47270600 Weak transcription iPS-15b Cell Line embryonic stem cell
41 chr16:47258400-47292000 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr16:47258600-47291400 Weak transcription Fetal Muscle Trunk muscle
43 chr16:47258600-47291600 Weak transcription Primary hematopoietic stem cells blood
44 chr16:47258600-47298400 Weak transcription Fetal Intestine Small intestine
45 chr16:47259000-47281400 Weak transcription Cortex derived primary cultured neurospheres brain
46 chr16:47259200-47280400 Weak transcription Fetal Stomach stomach
47 chr16:47259200-47291400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr16:47259400-47286200 Weak transcription Fetal Lung lung
49 chr16:47259600-47270600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr16:47259600-47291600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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