Variant report

Variant	rs16945353
Chromosome Location	chr16:47439217-47439218
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr16:47437100..47439827-chr16:47493895..47495575,2	K562	blood:

Variant related genes	Relation type
ENSG00000129636	Chromatin interaction
ENSG00000102893	Chromatin interaction

Extended variants
information (count: 200 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:184)

rs_ID	r²[population]
rs1011532	0.92[EUR][1000 genomes]
rs1018171	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10521162	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10521163	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11859615	0.89[EUR][1000 genomes]
rs11860257	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11860828	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11860969	0.89[EUR][1000 genomes]
rs11861008	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11862096	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11862281	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11862517	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11863178	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.87[LWK][hapmap];1.00[MEX][hapmap];0.83[MKK][hapmap];1.00[TSI][hapmap];0.92[YRI][hapmap];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11865790	0.82[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.91[LWK][hapmap];0.85[MEX][hapmap];0.85[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1200967	0.92[EUR][1000 genomes]
rs13330181	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13330510	0.92[EUR][1000 genomes]
rs13330699	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13330832	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];0.90[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13331418	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13332032	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13332058	1.00[CEU][hapmap];0.96[YRI][hapmap];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13332800	0.93[ASW][hapmap];0.82[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.89[LWK][hapmap];1.00[MEX][hapmap];0.89[MKK][hapmap];0.88[TSI][hapmap];0.92[YRI][hapmap];0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs13332953	1.00[CEU][hapmap];0.92[YRI][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13333003	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs13334239	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13334342	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.91[LWK][hapmap];1.00[MEX][hapmap];0.85[MKK][hapmap];0.92[YRI][hapmap];0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13334981	0.86[EUR][1000 genomes]
rs13335171	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13336943	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13338489	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13339357	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13339406	0.82[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1541589	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16942513	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16945354	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945357	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.91[LWK][hapmap];1.00[MEX][hapmap];0.90[MKK][hapmap];1.00[TSI][hapmap];0.92[YRI][hapmap];0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16945358	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs16945372	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs16945379	1.00[EUR][1000 genomes]
rs16945382	1.00[EUR][1000 genomes]
rs16945387	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs16945408	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.91[LWK][hapmap];1.00[MEX][hapmap];0.87[MKK][hapmap];1.00[TSI][hapmap];0.92[YRI][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16945413	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];0.87[MKK][hapmap];1.00[TSI][hapmap];0.92[YRI][hapmap];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16945430	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs16945438	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16945443	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16945460	0.92[EUR][1000 genomes]
rs16945474	0.92[EUR][1000 genomes]
rs16952501	0.89[EUR][1000 genomes]
rs16952538	0.89[EUR][1000 genomes]
rs16952589	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs16952886	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs16953067	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs16953992	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16954067	0.82[CEU][hapmap];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs16955095	1.00[EUR][1000 genomes]
rs16955781	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16956024	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16956031	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16956083	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16956093	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2062968	1.00[CEU][hapmap];0.92[YRI][hapmap];0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2078256	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2111226	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2341961	0.92[EUR][1000 genomes]
rs28450418	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28457669	0.96[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs28482463	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28532949	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28566542	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28577929	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28597108	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.91[LWK][hapmap];1.00[MEX][hapmap];0.87[MKK][hapmap];1.00[TSI][hapmap];0.92[YRI][hapmap];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs28681341	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2880205	0.92[EUR][1000 genomes]
rs28840689	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs28844885	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28898390	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4386162	0.96[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs56268318	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs56819508	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56830681	1.00[EUR][1000 genomes]
rs57543382	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57772915	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57884999	1.00[EUR][1000 genomes]
rs58190241	0.92[EUR][1000 genomes]
rs58251914	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58837077	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs59305841	0.89[EUR][1000 genomes]
rs59453301	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59547333	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60200500	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs61053970	0.92[EUR][1000 genomes]
rs61078258	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6598800	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7184206	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7185641	0.87[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.89[LWK][hapmap];1.00[TSI][hapmap];0.85[YRI][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7185915	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.89[LWK][hapmap];1.00[MEX][hapmap];0.90[MKK][hapmap];1.00[TSI][hapmap];0.89[YRI][hapmap];0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7192537	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7194190	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs7194249	1.00[EUR][1000 genomes]
rs7195074	0.92[EUR][1000 genomes]
rs7196244	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7197586	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7197659	0.92[EUR][1000 genomes]
rs7197973	0.96[EUR][1000 genomes]
rs7199696	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7199958	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7200041	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7200149	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7200554	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7202716	0.95[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7202975	0.96[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7204944	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.85[MKK][hapmap];1.00[TSI][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73534789	0.92[EUR][1000 genomes]
rs73534794	0.89[EUR][1000 genomes]
rs73536876	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs73536884	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs73536895	0.89[EUR][1000 genomes]
rs73536899	0.89[EUR][1000 genomes]
rs73536906	0.92[EUR][1000 genomes]
rs73536913	0.92[EUR][1000 genomes]
rs73538910	0.96[EUR][1000 genomes]
rs73538974	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73538980	0.92[EUR][1000 genomes]
rs73538991	0.92[EUR][1000 genomes]
rs73538993	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs73538997	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73539001	1.00[EUR][1000 genomes]
rs73541004	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73541007	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73541010	1.00[EUR][1000 genomes]
rs73541086	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73541089	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73541102	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73543108	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73543111	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73543118	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73547271	1.00[EUR][1000 genomes]
rs73547284	1.00[EUR][1000 genomes]
rs73547290	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73549309	1.00[EUR][1000 genomes]
rs73549315	1.00[EUR][1000 genomes]
rs73549319	1.00[EUR][1000 genomes]
rs73549387	1.00[EUR][1000 genomes]
rs73551204	1.00[EUR][1000 genomes]
rs73551214	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73551221	0.92[EUR][1000 genomes]
rs73551224	0.85[EUR][1000 genomes]
rs73551228	0.92[EUR][1000 genomes]
rs73551230	0.92[EUR][1000 genomes]
rs73551233	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73551238	0.92[EUR][1000 genomes]
rs7498593	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7499413	1.00[EUR][1000 genomes]
rs8044842	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs8047754	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs8051273	1.00[EUR][1000 genomes]
rs8052294	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs8053323	0.93[ASW][hapmap];0.82[CEU][hapmap];1.00[GIH][hapmap];0.91[LWK][hapmap];0.88[TSI][hapmap];0.96[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8054017	0.92[EUR][1000 genomes]
rs8054582	0.92[EUR][1000 genomes]
rs8055882	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs8063584	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs9328591	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.89[LWK][hapmap];1.00[MEX][hapmap];0.92[MKK][hapmap];1.00[TSI][hapmap];0.92[YRI][hapmap]
rs9328592	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9328707	0.89[EUR][1000 genomes]
rs9921542	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9921947	1.00[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs9922569	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.83[MKK][hapmap];1.00[TSI][hapmap];0.85[YRI][hapmap];0.80[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9922635	0.89[EUR][1000 genomes]
rs9926490	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9926965	0.89[EUR][1000 genomes]
rs9927084	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9928466	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9928688	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9932230	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9933052	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9935427	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.91[LWK][hapmap];1.00[MEX][hapmap];0.85[MKK][hapmap];1.00[TSI][hapmap];0.92[YRI][hapmap];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9935641	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9936361	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9936434	1.00[CEU][hapmap];0.92[YRI][hapmap]
rs9936810	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9939920	0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:16 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1795199	chr16:47111119-47732476	Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Enhancers Bivalent/Poised TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
2	nsv916572	chr16:47227786-47646103	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
3	nsv933151	chr16:47236330-47646103	Weak transcription Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
4	esv2757637	chr16:47261512-47595005	Weak transcription ZNF genes & repeats Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
5	esv2758644	chr16:47261512-47606287	Weak transcription Strong transcription Enhancers ZNF genes & repeats Active TSS Genic enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
6	nsv1060396	chr16:47264261-47469345	Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
7	nsv428656	chr16:47316866-47469918	Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
8	esv2758423	chr16:47316866-47606287	Weak transcription Strong transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
9	nsv427983	chr16:47316866-47606287	Strong transcription Enhancers ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
10	nsv533068	chr16:47354593-47559639	ZNF genes & repeats Flanking Active TSS Strong transcription Weak transcription Active TSS Enhancers Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
11	nsv833217	chr16:47358148-47527655	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
12	esv34317	chr16:47390600-47672479	Weak transcription ZNF genes & repeats Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
13	esv1822041	chr16:47399460-47569732	Strong transcription Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Enhancers Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
14	nsv572537	chr16:47411203-47599502	Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
15	nsv520355	chr16:47424828-48164777	Weak transcription Flanking Active TSS Active TSS Enhancers Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
16	nsv960006	chr16:47435751-47460534	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:77 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:47388600-47445000	Weak transcription	NHEK	skin
2	chr16:47393000-47458200	Weak transcription	Pancreas	Pancrea
3	chr16:47393000-47459000	Weak transcription	NHDF-Ad	bronchial
4	chr16:47397800-47458800	Weak transcription	Colonic Mucosa	Colon
5	chr16:47404400-47458800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr16:47404800-47444400	Weak transcription	Lung	lung
7	chr16:47404800-47444800	Weak transcription	Fetal Intestine Small	intestine
8	chr16:47404800-47458600	Weak transcription	Aorta	Aorta
9	chr16:47405600-47458200	Weak transcription	Brain Anterior Caudate	brain
10	chr16:47405800-47454000	Weak transcription	Rectal Mucosa Donor 29	rectum
11	chr16:47409000-47450800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr16:47409600-47442400	Weak transcription	Hela-S3	cervix
13	chr16:47409600-47458600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
14	chr16:47409600-47458600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
15	chr16:47409800-47454000	Weak transcription	Duodenum Smooth Muscle	Duodenum
16	chr16:47409800-47454000	Weak transcription	HSMM	muscle
17	chr16:47410000-47458400	Weak transcription	Stomach Smooth Muscle	stomach
18	chr16:47415000-47444400	Weak transcription	Fetal Stomach	stomach
19	chr16:47417800-47447000	Weak transcription	Brain Cingulate Gyrus	brain
20	chr16:47419200-47444600	Weak transcription	Spleen	Spleen
21	chr16:47421800-47450600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
22	chr16:47424600-47458400	Weak transcription	Brain Angular Gyrus	brain
23	chr16:47426400-47444600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
24	chr16:47426400-47444800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
25	chr16:47426400-47458600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
26	chr16:47426400-47482800	Weak transcription	NH-A	brain
27	chr16:47426600-47444400	Weak transcription	Thymus	Thymus
28	chr16:47426600-47444600	Weak transcription	Primary B cells from peripheral blood	blood
29	chr16:47426600-47445000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
30	chr16:47426600-47447000	Weak transcription	Cortex derived primary cultured neurospheres	brain
31	chr16:47426600-47454200	Weak transcription	GM12878-XiMat	blood
32	chr16:47426600-47458600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
33	chr16:47426600-47459000	Weak transcription	Osteobl	bone
34	chr16:47427000-47445000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
35	chr16:47427000-47445200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
36	chr16:47427200-47444800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
37	chr16:47427200-47445200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
38	chr16:47427200-47445200	Weak transcription	Primary T helper cells fromperipheralblood	blood
39	chr16:47427200-47458600	Weak transcription	Gastric	stomach
40	chr16:47428600-47458200	Weak transcription	Brain Substantia Nigra	brain
41	chr16:47428600-47458600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
42	chr16:47430200-47444400	Weak transcription	Fetal Muscle Trunk	muscle
43	chr16:47430200-47445200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
44	chr16:47430200-47458800	Weak transcription	Right Ventricle	heart
45	chr16:47430400-47444600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
46	chr16:47430400-47485600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
47	chr16:47430600-47444400	Weak transcription	HepG2	liver
48	chr16:47430600-47458200	Weak transcription	Fetal Muscle Leg	muscle
49	chr16:47430600-47458600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
50	chr16:47430600-47458600	Weak transcription	Primary hematopoietic stem cells	blood

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