The 2.0 version of rSNPBase

Variant report

Variant rs28566542
Chromosome Location chr16:47510613-47510614
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:47496200-47515000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr16:47496200-47526400 Weak transcription Pancreas Pancrea
3 chr16:47496200-47532000 Weak transcription Ovary ovary
4 chr16:47496200-47538400 Weak transcription NH-A brain
5 chr16:47496400-47512000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
6 chr16:47496400-47523400 Weak transcription Fetal Lung lung
7 chr16:47496600-47522600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
8 chr16:47497000-47522400 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr16:47497200-47511400 Weak transcription NHLF lung
10 chr16:47497200-47515600 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr16:47497200-47521600 Weak transcription Primary neutrophils fromperipheralblood blood
12 chr16:47498200-47517600 Weak transcription A549 lung
13 chr16:47498200-47527800 Weak transcription Small Intestine intestine
14 chr16:47498400-47521400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr16:47498400-47521600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr16:47498400-47526000 Weak transcription Primary T cells fromperipheralblood blood
17 chr16:47498600-47518200 Weak transcription Fetal Muscle Trunk muscle
18 chr16:47498800-47516600 Weak transcription Fetal Muscle Leg muscle
19 chr16:47498800-47517400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr16:47498800-47526400 Weak transcription Esophagus oesophagus
21 chr16:47499000-47517200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr16:47499000-47526400 Weak transcription Fetal Stomach stomach
23 chr16:47499400-47515600 Weak transcription Primary T cells from cord blood blood
24 chr16:47499400-47517800 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr16:47499400-47518600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
26 chr16:47499400-47523400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr16:47500200-47512800 Weak transcription Primary T helper cells PMA-I stimulated --
28 chr16:47500200-47512800 Weak transcription Rectal Smooth Muscle rectum
29 chr16:47500200-47517800 Weak transcription Primary T helper cells fromperipheralblood blood
30 chr16:47500400-47510800 Weak transcription Colon Smooth Muscle Colon
31 chr16:47500400-47512800 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr16:47500400-47515600 Weak transcription Liver Liver
33 chr16:47500400-47520400 Weak transcription Brain Germinal Matrix brain
34 chr16:47500400-47521400 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr16:47500400-47521600 Weak transcription Dnd41 blood
36 chr16:47501800-47510800 Weak transcription NHDF-Ad bronchial
37 chr16:47501800-47515000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr16:47501800-47518200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
39 chr16:47502000-47520000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr16:47502200-47523400 Weak transcription Rectal Mucosa Donor 29 rectum
41 chr16:47502400-47512800 Weak transcription Placenta Placenta
42 chr16:47502400-47513400 Weak transcription Right Atrium heart
43 chr16:47502400-47533200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr16:47502600-47513600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr16:47502800-47513200 Weak transcription Primary hematopoietic stem cells blood
46 chr16:47502800-47513400 Weak transcription GM12878-XiMat blood
47 chr16:47503000-47515400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr16:47503200-47513600 Weak transcription Brain Hippocampus Middle brain
49 chr16:47503200-47521800 Weak transcription Primary hematopoietic stem cells short term culture blood
50 chr16:47503600-47511400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015