Variant report

Variant rs56819508
Chromosome Location chr16:47332998-47332999
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:47292200-47345600 Weak transcription K562 blood
2 chr16:47297600-47333200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
3 chr16:47311400-47341800 Weak transcription Skeletal Muscle Male skeletal muscle
4 chr16:47311400-47362200 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr16:47314000-47333800 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr16:47318000-47345600 Weak transcription Brain Angular Gyrus brain
7 chr16:47318000-47345600 Weak transcription Brain Cingulate Gyrus brain
8 chr16:47318000-47354200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr16:47318200-47345000 Weak transcription Brain Inferior Temporal Lobe brain
10 chr16:47318600-47346000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr16:47319400-47348200 Weak transcription Colon Smooth Muscle Colon
12 chr16:47319600-47350400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr16:47320000-47344000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr16:47322000-47347600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr16:47326400-47344000 Weak transcription Small Intestine intestine
16 chr16:47326800-47344200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr16:47327800-47346200 Weak transcription Fetal Brain Male brain
18 chr16:47330800-47345000 Weak transcription HUES6 Cell Line embryonic stem cell
19 chr16:47331200-47333000 Weak transcription Fetal Brain Female brain
20 chr16:47331400-47347800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
21 chr16:47331600-47344600 Weak transcription Brain Substantia Nigra brain
22 chr16:47332000-47333200 Weak transcription Colonic Mucosa Colon
23 chr16:47332200-47333600 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
24 chr16:47332200-47334000 Strong transcription HSMM muscle
25 chr16:47332200-47334600 Strong transcription Primary B cells from peripheral blood blood
26 chr16:47332200-47338000 Weak transcription Fetal Heart heart
27 chr16:47332400-47333000 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
28 chr16:47332400-47333200 Strong transcription Sigmoid Colon Sigmoid Colon
29 chr16:47332400-47333400 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
30 chr16:47332400-47333600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
31 chr16:47332400-47333600 Strong transcription HSMMtube muscle
32 chr16:47332400-47334400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr16:47332400-47334400 Strong transcription Aorta Aorta
34 chr16:47332400-47334600 Strong transcription Primary T cells from cord blood blood
35 chr16:47332400-47334600 Strong transcription Duodenum Smooth Muscle Duodenum
36 chr16:47332400-47334800 Strong transcription HepG2 liver
37 chr16:47332400-47335000 Strong transcription Primary B cells from cord blood blood
38 chr16:47332400-47335000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
39 chr16:47332400-47335200 Strong transcription Monocytes-CD14+_RO01746 blood
40 chr16:47332400-47344000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr16:47332600-47333000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr16:47332600-47333000 ZNF genes & repeats Brain Germinal Matrix brain
43 chr16:47332600-47333000 ZNF genes & repeats Lung lung
44 chr16:47332600-47333200 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
45 chr16:47332600-47333200 Strong transcription Muscle Satellite Cultured Cells --
46 chr16:47332600-47333200 ZNF genes & repeats Primary mononuclear cells fromperipheralblood Blood
47 chr16:47332600-47333200 Genic enhancers Duodenum Mucosa Duodenum
48 chr16:47332600-47333200 Strong transcription Rectal Mucosa Donor 29 rectum
49 chr16:47332600-47333400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr16:47332600-47333400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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