The 2.0 version of rSNPBase

Variant report

Variant rs73551204
Chromosome Location chr16:47597485-47597486
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:47539400-47599000 Weak transcription NHEK skin
2 chr16:47548800-47605000 Weak transcription Right Ventricle heart
3 chr16:47553600-47599000 Weak transcription NHLF lung
4 chr16:47580000-47599200 Weak transcription Osteobl bone
5 chr16:47581000-47599000 Weak transcription HSMM muscle
6 chr16:47581000-47615800 Weak transcription Placenta Placenta
7 chr16:47581000-47624200 Weak transcription Brain Substantia Nigra brain
8 chr16:47581200-47624600 Weak transcription Colonic Mucosa Colon
9 chr16:47581200-47627400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr16:47581400-47641800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr16:47581800-47599000 Weak transcription Muscle Satellite Cultured Cells --
12 chr16:47581800-47621400 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr16:47582000-47608200 Weak transcription Fetal Thymus thymus
14 chr16:47582000-47624200 Weak transcription Fetal Kidney kidney
15 chr16:47582200-47625000 Weak transcription Fetal Heart heart
16 chr16:47584600-47599000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr16:47584600-47599000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr16:47584600-47599200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr16:47584600-47599200 Weak transcription K562 blood
20 chr16:47584600-47599200 Weak transcription NH-A brain
21 chr16:47584600-47599400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr16:47584600-47600600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr16:47584600-47604200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr16:47584600-47607000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr16:47584600-47624400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
26 chr16:47584600-47624400 Weak transcription Colon Smooth Muscle Colon
27 chr16:47584800-47598200 Weak transcription Primary T helper cells PMA-I stimulated --
28 chr16:47584800-47598800 Weak transcription Primary neutrophils fromperipheralblood blood
29 chr16:47584800-47599200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr16:47584800-47599200 Weak transcription Left Ventricle heart
31 chr16:47584800-47599600 Weak transcription Stomach Smooth Muscle stomach
32 chr16:47584800-47601800 Weak transcription Brain Hippocampus Middle brain
33 chr16:47584800-47622600 Weak transcription Brain Angular Gyrus brain
34 chr16:47586200-47599200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr16:47586200-47605800 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr16:47586800-47600600 Weak transcription Pancreatic Islets Pancreatic Islet
37 chr16:47587000-47599200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr16:47588000-47598800 Weak transcription GM12878-XiMat blood
39 chr16:47588000-47599600 Weak transcription Brain Germinal Matrix brain
40 chr16:47588000-47607400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr16:47588200-47599000 Weak transcription Primary T cells fromperipheralblood blood
42 chr16:47588200-47599000 Weak transcription Primary T helper cells fromperipheralblood blood
43 chr16:47588200-47599600 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr16:47588200-47599800 Weak transcription Primary T helper naive cells fromperipheralblood blood
45 chr16:47588200-47599800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr16:47588200-47606600 Weak transcription Duodenum Mucosa Duodenum
47 chr16:47588200-47622600 Weak transcription Fetal Lung lung
48 chr16:47588400-47599000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
49 chr16:47588400-47599000 Weak transcription Fetal Intestine Large intestine
50 chr16:47588400-47599800 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015