The 2.0 version of rSNPBase

Variant report

Variant rs11862281
Chromosome Location chr16:47660034-47660035
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:47609600-47694400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr16:47625200-47668400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr16:47626200-47676600 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr16:47626200-47677600 Weak transcription Aorta Aorta
5 chr16:47626400-47670400 Weak transcription Fetal Intestine Small intestine
6 chr16:47626600-47660800 Weak transcription Stomach Mucosa stomach
7 chr16:47626600-47670200 Weak transcription Spleen Spleen
8 chr16:47626600-47671000 Weak transcription Esophagus oesophagus
9 chr16:47626600-47724600 Weak transcription Small Intestine intestine
10 chr16:47627000-47685000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr16:47633000-47676200 Weak transcription Rectal Smooth Muscle rectum
12 chr16:47635000-47664800 Weak transcription Pancreas Pancrea
13 chr16:47635200-47684200 Weak transcription Ovary ovary
14 chr16:47635600-47670400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr16:47645000-47677800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr16:47645400-47670800 Weak transcription Fetal Muscle Trunk muscle
17 chr16:47645400-47676600 Weak transcription Fetal Thymus thymus
18 chr16:47645600-47667400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr16:47645600-47668400 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr16:47646000-47667800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr16:47646200-47677200 Weak transcription HSMMtube muscle
22 chr16:47646600-47671000 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr16:47646800-47667400 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr16:47647000-47668200 Weak transcription Primary T helper cells fromperipheralblood blood
25 chr16:47647000-47669400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr16:47647200-47667200 Weak transcription Primary T cells fromperipheralblood blood
27 chr16:47647200-47667800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr16:47647200-47668400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
29 chr16:47647200-47668600 Weak transcription Adipose Nuclei Adipose
30 chr16:47647200-47675800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr16:47647400-47668400 Weak transcription Duodenum Mucosa Duodenum
32 chr16:47647400-47669000 Weak transcription Dnd41 blood
33 chr16:47647400-47670800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr16:47647400-47676600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr16:47647600-47668600 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr16:47647600-47670200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr16:47647600-47684200 Weak transcription Fetal Muscle Leg muscle
38 chr16:47647800-47668400 Weak transcription Primary T regulatory cells fromperipheralblood blood
39 chr16:47648200-47667400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
40 chr16:47648200-47668600 Weak transcription Thymus Thymus
41 chr16:47648400-47660800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr16:47648400-47668400 Weak transcription Stomach Smooth Muscle stomach
43 chr16:47649400-47660800 Weak transcription Primary hematopoietic stem cells short term culture blood
44 chr16:47649400-47668400 Weak transcription Gastric stomach
45 chr16:47649600-47662200 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr16:47649600-47667400 Weak transcription Fetal Intestine Large intestine
47 chr16:47649600-47667800 Weak transcription Left Ventricle heart
48 chr16:47649600-47668400 Weak transcription Primary hematopoietic stem cells blood
49 chr16:47649600-47668400 Weak transcription Lung lung
50 chr16:47651000-47662400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015