The 2.0 version of rSNPBase

Variant report

Variant rs6598598
Chromosome Location chr16:47736231-47736232
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:47696000-47737800 Weak transcription HMEC breast
2 chr16:47711600-47736600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr16:47717800-47746600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr16:47724800-47739200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr16:47727400-47736600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr16:47727600-47738600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr16:47727600-47746800 Weak transcription HSMM muscle
8 chr16:47729000-47737200 Weak transcription NHDF-Ad bronchial
9 chr16:47729600-47744200 Weak transcription Gastric stomach
10 chr16:47730800-47746200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr16:47731200-47738200 Weak transcription NH-A brain
12 chr16:47731800-47739800 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr16:47731800-47746200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr16:47732000-47736800 Weak transcription Colon Smooth Muscle Colon
15 chr16:47732000-47738000 Weak transcription Psoas Muscle Psoas
16 chr16:47732000-47740400 Weak transcription Pancreas Pancrea
17 chr16:47732000-47746200 Weak transcription Lung lung
18 chr16:47732000-47746400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr16:47732000-47746400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr16:47733400-47737600 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr16:47733400-47739200 Weak transcription Spleen Spleen
22 chr16:47733400-47743200 Weak transcription Primary T regulatory cells fromperipheralblood blood
23 chr16:47733400-47745600 Weak transcription Fetal Adrenal Gland Adrenal Gland
24 chr16:47733400-47745600 Weak transcription Placenta Placenta
25 chr16:47733400-47747200 Weak transcription Duodenum Mucosa Duodenum
26 chr16:47733600-47736400 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr16:47733600-47736400 Weak transcription K562 blood
28 chr16:47733600-47736600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr16:47733600-47736600 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr16:47733600-47737000 Weak transcription Liver Liver
31 chr16:47733600-47737000 Weak transcription Fetal Stomach stomach
32 chr16:47733600-47737200 Weak transcription Muscle Satellite Cultured Cells --
33 chr16:47733600-47737200 Weak transcription Skeletal Muscle Male skeletal muscle
34 chr16:47733600-47737600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr16:47733600-47737800 Weak transcription A549 lung
36 chr16:47733600-47738000 Weak transcription HepG2 liver
37 chr16:47733600-47738400 Weak transcription Fetal Brain Female brain
38 chr16:47733600-47738400 Weak transcription NHEK skin
39 chr16:47733600-47739000 Weak transcription Osteobl bone
40 chr16:47733600-47739600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr16:47733600-47740400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr16:47733600-47746400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr16:47733600-47746600 Weak transcription GM12878-XiMat blood
44 chr16:47733800-47736400 Weak transcription Primary T helper cells PMA-I stimulated --
45 chr16:47733800-47737000 Weak transcription Skeletal Muscle Female skeletal muscle
46 chr16:47733800-47737200 Weak transcription Adipose Nuclei Adipose
47 chr16:47733800-47744600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr16:47733800-47750200 Weak transcription Brain Germinal Matrix brain
49 chr16:47735000-47736600 Weak transcription Primary B cells from cord blood blood
50 chr16:47735000-47736600 Weak transcription Dnd41 blood

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Last update: Aug 31, 2015