Variant report

Variant	rs7194249
Chromosome Location	chr16:47583872-47583873
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 258 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:244)

rs_ID	r²[population]
rs1011532	0.82[CEU][hapmap];1.00[CHB][hapmap];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10521162	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10521163	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11860257	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11860828	0.82[CEU][hapmap];1.00[CHB][hapmap];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11861008	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11862096	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11862281	0.82[CEU][hapmap];1.00[CHB][hapmap];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11862517	1.00[EUR][1000 genomes]
rs11863178	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11865790	0.82[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];0.96[EUR][1000 genomes]
rs1200967	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13330181	1.00[EUR][1000 genomes]
rs13330337	0.92[EUR][1000 genomes]
rs13330510	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13330699	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13330832	1.00[EUR][1000 genomes]
rs13331418	1.00[EUR][1000 genomes]
rs13331748	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13332032	1.00[EUR][1000 genomes]
rs13332058	0.82[CEU][hapmap];1.00[CHB][hapmap];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13332953	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13333003	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13334239	1.00[EUR][1000 genomes]
rs13334342	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.82[MEX][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13334408	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13335171	1.00[EUR][1000 genomes]
rs13335407	0.92[EUR][1000 genomes]
rs13336943	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13337972	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13338489	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13339357	1.00[EUR][1000 genomes]
rs1486419	0.92[EUR][1000 genomes]
rs1541589	1.00[EUR][1000 genomes]
rs16942513	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945353	0.82[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs16945354	1.00[EUR][1000 genomes]
rs16945357	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945358	0.82[CEU][hapmap];1.00[CHB][hapmap];0.93[YRI][hapmap];0.96[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945372	1.00[ASW][hapmap];0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945379	0.94[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945382	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945386	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs16945387	1.00[ASN][1000 genomes]
rs16945401	1.00[ASN][1000 genomes]
rs16945408	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945413	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945430	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945438	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945443	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945460	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945474	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945493	1.00[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs16945509	0.82[CEU][hapmap];1.00[CHB][hapmap];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945543	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945553	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs16945557	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16945594	0.80[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16945617	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16945621	0.80[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16945624	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16945629	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16945641	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16945644	0.80[AFR][1000 genomes];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16945648	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16945650	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16945652	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16945661	0.92[EUR][1000 genomes]
rs16955095	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16955781	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16956024	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16956031	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16956083	1.00[EUR][1000 genomes]
rs16956093	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1901903	0.92[EUR][1000 genomes]
rs2046531	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2054000	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2101373	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2111226	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2341961	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28385551	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs28448361	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs28450418	1.00[EUR][1000 genomes]
rs28482463	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28497443	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs28532949	0.96[EUR][1000 genomes]
rs28542319	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs28566542	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28577066	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs28577929	1.00[EUR][1000 genomes]
rs28590410	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs28597108	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28681341	1.00[EUR][1000 genomes]
rs28688420	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs28712810	0.92[EUR][1000 genomes]
rs28754618	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2880205	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28844885	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28865322	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs28898390	1.00[EUR][1000 genomes]
rs4271615	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs56268318	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56687111	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs56819508	1.00[EUR][1000 genomes]
rs56830681	0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57543382	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57772915	1.00[EUR][1000 genomes]
rs57884999	0.97[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58190241	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58251914	1.00[EUR][1000 genomes]
rs58550976	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59453301	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59547333	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60200500	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61053970	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61078258	1.00[EUR][1000 genomes]
rs61465994	0.80[AFR][1000 genomes];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6598598	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6598602	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6598613	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7184358	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7185641	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7185753	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7185915	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7186864	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7186924	0.85[EUR][1000 genomes]
rs7187134	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7187393	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7189446	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7190399	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7192537	1.00[EUR][1000 genomes]
rs7193794	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7194190	0.82[CEU][hapmap];1.00[CHB][hapmap];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7195074	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.82[MEX][hapmap];0.82[MKK][hapmap];1.00[TSI][hapmap];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7196244	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7197471	0.92[EUR][1000 genomes]
rs7197586	1.00[EUR][1000 genomes]
rs7197659	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7197882	0.82[CEU][hapmap];1.00[CHB][hapmap];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7199392	0.82[CEU][hapmap];1.00[CHB][hapmap];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7199696	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7199958	1.00[EUR][1000 genomes]
rs7200041	1.00[EUR][1000 genomes]
rs7200149	1.00[EUR][1000 genomes]
rs7200406	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7200554	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7201764	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7202145	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7202457	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7202612	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7202716	1.00[EUR][1000 genomes]
rs7203019	0.80[AFR][1000 genomes];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7204944	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73534789	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73534794	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73536906	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73536913	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73536920	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73536936	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73536939	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73538993	0.89[EUR][1000 genomes]
rs73538997	1.00[EUR][1000 genomes]
rs73539001	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73541004	1.00[EUR][1000 genomes]
rs73541007	1.00[EUR][1000 genomes]
rs73541010	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73541086	0.89[AFR][1000 genomes];0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73541089	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73541102	0.91[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73543108	1.00[EUR][1000 genomes]
rs73543111	1.00[EUR][1000 genomes]
rs73543118	0.91[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73544253	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73544267	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73544271	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73544281	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73544284	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73546131	0.80[AFR][1000 genomes];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73546132	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73546138	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73546141	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73546143	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73547271	0.97[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73547284	0.94[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73547290	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73547296	0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs73549309	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73549315	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73549319	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73549387	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73551204	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73551214	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73551221	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73551224	0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73551228	0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73551230	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73551233	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73551238	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7498593	1.00[EUR][1000 genomes]
rs7499413	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8044496	0.92[EUR][1000 genomes]
rs8046175	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8046259	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs8047342	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8048233	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8048279	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs8049111	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs8051273	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8052294	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8053323	1.00[EUR][1000 genomes]
rs8054017	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8054582	0.82[CEU][hapmap];1.00[CHB][hapmap];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8055695	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs8061062	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs8061556	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs8061656	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs8062269	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs876258	0.82[CEU][hapmap];1.00[CHB][hapmap];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9328591	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap]
rs9328592	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9328600	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9746012	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9746020	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9746028	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9921542	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9922381	0.82[CEU][hapmap];1.00[CHB][hapmap];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9922569	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9923591	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9926490	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9927084	0.96[EUR][1000 genomes]
rs9927829	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9929392	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9929794	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9930026	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9931638	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9932128	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9932230	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9933052	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9934478	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9935427	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9935542	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9936361	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9936434	0.82[CEU][hapmap];1.00[CHB][hapmap]
rs9936580	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:14 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1795199	chr16:47111119-47732476	Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Enhancers Bivalent/Poised TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
2	nsv916572	chr16:47227786-47646103	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
3	nsv933151	chr16:47236330-47646103	Weak transcription Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
4	esv2757637	chr16:47261512-47595005	Weak transcription ZNF genes & repeats Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
5	esv2758644	chr16:47261512-47606287	Weak transcription Strong transcription Enhancers ZNF genes & repeats Active TSS Genic enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
6	esv2758423	chr16:47316866-47606287	Weak transcription Strong transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
7	nsv427983	chr16:47316866-47606287	Strong transcription Enhancers ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
8	esv34317	chr16:47390600-47672479	Weak transcription ZNF genes & repeats Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
9	nsv572537	chr16:47411203-47599502	Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
10	nsv520355	chr16:47424828-48164777	Weak transcription Flanking Active TSS Active TSS Enhancers Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
11	esv1794084	chr16:47478207-47676184	Weak transcription ZNF genes & repeats Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
12	nsv1059367	chr16:47524706-47586335	ZNF genes & repeats Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
13	esv2761905	chr16:47524718-47586347	Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
14	nsv525976	chr16:47583872-48035026	Strong transcription Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs7194249	Hs.42217	cis	multi-tissue	Pritchard

Chromatin state (count:112 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:47539400-47599000	Weak transcription	NHEK	skin
2	chr16:47548800-47605000	Weak transcription	Right Ventricle	heart
3	chr16:47553600-47599000	Weak transcription	NHLF	lung
4	chr16:47558000-47587400	Weak transcription	A549	lung
5	chr16:47572600-47584000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
6	chr16:47573400-47584800	Weak transcription	Placenta Amnion	Placenta Amnion
7	chr16:47574000-47584000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr16:47577200-47588800	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr16:47579400-47587200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
10	chr16:47579600-47584200	Strong transcription	Primary B cells from peripheral blood	blood
11	chr16:47580000-47584600	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr16:47580000-47599200	Weak transcription	Osteobl	bone
13	chr16:47580200-47584800	ZNF genes & repeats	Primary monocytes fromperipheralblood	blood
14	chr16:47580200-47593400	Weak transcription	Psoas Muscle	Psoas
15	chr16:47580600-47584600	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
16	chr16:47580800-47585000	Strong transcription	Primary T helper cells fromperipheralblood	blood
17	chr16:47581000-47584000	Strong transcription	Primary B cells from cord blood	blood
18	chr16:47581000-47584000	Weak transcription	Fetal Brain Male	brain
19	chr16:47581000-47584600	Strong transcription	HepG2	liver
20	chr16:47581000-47587600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
21	chr16:47581000-47596000	Weak transcription	Brain Anterior Caudate	brain
22	chr16:47581000-47599000	Weak transcription	HSMM	muscle
23	chr16:47581000-47615800	Weak transcription	Placenta	Placenta
24	chr16:47581000-47624200	Weak transcription	Brain Substantia Nigra	brain
25	chr16:47581200-47584000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
26	chr16:47581200-47584000	Weak transcription	Aorta	Aorta
27	chr16:47581200-47584000	Weak transcription	Brain Angular Gyrus	brain
28	chr16:47581200-47584000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
29	chr16:47581200-47584000	Weak transcription	Esophagus	oesophagus
30	chr16:47581200-47584000	Weak transcription	Rectal Smooth Muscle	rectum
31	chr16:47581200-47584000	Weak transcription	Spleen	Spleen
32	chr16:47581200-47584400	Strong transcription	Cortex derived primary cultured neurospheres	brain
33	chr16:47581200-47584400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
34	chr16:47581200-47584800	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
35	chr16:47581200-47624600	Weak transcription	Colonic Mucosa	Colon
36	chr16:47581200-47627400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
37	chr16:47581400-47584000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
38	chr16:47581400-47584000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
39	chr16:47581400-47584000	Weak transcription	Brain Hippocampus Middle	brain
40	chr16:47581400-47584000	Weak transcription	Brain Inferior Temporal Lobe	brain
41	chr16:47581400-47584000	Strong transcription	Duodenum Smooth Muscle	Duodenum
42	chr16:47581400-47584000	Weak transcription	Lung	lung
43	chr16:47581400-47584000	Weak transcription	Pancreas	Pancrea
44	chr16:47581400-47584000	Weak transcription	Thymus	Thymus
45	chr16:47581400-47584200	Strong transcription	Fetal Muscle Trunk	muscle
46	chr16:47581400-47584200	Weak transcription	Small Intestine	intestine
47	chr16:47581400-47584400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
48	chr16:47581400-47584800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
49	chr16:47581400-47585000	Weak transcription	H9 Cell Line	embryonic stem cell
50	chr16:47581400-47641800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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