Variant report

Variant	rs13334239
Chromosome Location	chr16:47455754-47455755
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 197 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:181)

rs_ID	r²[population]
rs1011532	0.92[EUR][1000 genomes]
rs1018171	0.96[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10521162	0.92[EUR][1000 genomes]
rs10521163	0.92[EUR][1000 genomes]
rs11860257	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11860828	0.92[EUR][1000 genomes]
rs11861008	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11862096	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11862281	0.92[EUR][1000 genomes]
rs11862517	0.83[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11863178	1.00[CEU][hapmap];0.95[YRI][hapmap];0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11865790	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[YRI][hapmap];0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1200967	0.92[EUR][1000 genomes]
rs13330181	0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13330510	0.92[EUR][1000 genomes]
rs13330699	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13330832	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13331418	0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13332032	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13332058	1.00[CEU][hapmap];1.00[YRI][hapmap];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13332800	0.95[YRI][hapmap];0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs13332953	1.00[CEU][hapmap];0.91[YRI][hapmap];0.83[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13333003	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs13334342	1.00[CEU][hapmap];0.95[YRI][hapmap];0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13335171	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13336943	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13338489	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13339357	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13339406	0.81[YRI][hapmap];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1541589	0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16942513	0.92[EUR][1000 genomes]
rs16945353	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[YRI][hapmap];0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945354	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945357	1.00[CEU][hapmap];0.95[YRI][hapmap];0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16945358	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs16945372	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs16945379	1.00[EUR][1000 genomes]
rs16945382	1.00[EUR][1000 genomes]
rs16945387	0.86[AFR][1000 genomes];0.88[AMR][1000 genomes]
rs16945408	1.00[CEU][hapmap];0.95[YRI][hapmap];0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16945413	1.00[CEU][hapmap];0.95[YRI][hapmap];0.83[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16945430	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs16945438	1.00[CEU][hapmap];0.95[YRI][hapmap];0.80[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16945443	0.92[EUR][1000 genomes]
rs16945460	0.92[EUR][1000 genomes]
rs16945474	0.92[EUR][1000 genomes]
rs16952538	0.89[EUR][1000 genomes]
rs16952589	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs16952886	0.96[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs16953067	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs16953992	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16954067	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs16955095	1.00[EUR][1000 genomes]
rs16955781	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16956024	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16956031	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16956083	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16956093	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2054000	0.92[EUR][1000 genomes]
rs2062968	1.00[CEU][hapmap];0.95[YRI][hapmap];0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2111226	0.82[AFR][1000 genomes];0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2341961	0.92[EUR][1000 genomes]
rs28450418	0.82[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28457669	0.92[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs28482463	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28532949	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28566542	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28577929	0.84[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28597108	1.00[CEU][hapmap];0.95[YRI][hapmap];0.80[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs28681341	0.82[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2880205	0.92[EUR][1000 genomes]
rs28840689	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs28844885	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28898390	0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4386162	0.92[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs56268318	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs56819508	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56830681	1.00[EUR][1000 genomes]
rs57543382	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57772915	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57884999	1.00[EUR][1000 genomes]
rs58190241	0.92[EUR][1000 genomes]
rs58251914	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58837077	0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs59305841	0.89[EUR][1000 genomes]
rs59453301	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59547333	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60200500	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs61053970	0.92[EUR][1000 genomes]
rs61078258	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6598598	0.92[EUR][1000 genomes]
rs6598800	0.96[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7184206	0.96[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7185641	1.00[CEU][hapmap];0.85[YRI][hapmap];0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7185915	1.00[CEU][hapmap];0.90[YRI][hapmap];0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7192537	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7194190	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs7194249	1.00[EUR][1000 genomes]
rs7195074	0.92[EUR][1000 genomes]
rs7196244	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7197586	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7197659	0.92[EUR][1000 genomes]
rs7197973	0.96[EUR][1000 genomes]
rs7199696	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7199958	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7200041	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7200149	0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7200554	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7202716	0.89[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7202975	0.92[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7204944	1.00[CEU][hapmap];0.81[YRI][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73534789	0.92[EUR][1000 genomes]
rs73534794	0.89[EUR][1000 genomes]
rs73536876	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs73536884	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs73536895	0.89[EUR][1000 genomes]
rs73536899	0.89[EUR][1000 genomes]
rs73536906	0.92[EUR][1000 genomes]
rs73536913	0.92[EUR][1000 genomes]
rs73536920	0.92[EUR][1000 genomes]
rs73538910	0.96[EUR][1000 genomes]
rs73538974	0.96[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73538980	0.92[EUR][1000 genomes]
rs73538991	0.92[EUR][1000 genomes]
rs73538993	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs73538997	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73539001	1.00[EUR][1000 genomes]
rs73541004	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73541007	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73541010	1.00[EUR][1000 genomes]
rs73541086	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73541089	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73541102	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73543108	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73543111	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73543118	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73547271	1.00[EUR][1000 genomes]
rs73547284	1.00[EUR][1000 genomes]
rs73547290	0.84[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73549309	1.00[EUR][1000 genomes]
rs73549315	1.00[EUR][1000 genomes]
rs73549319	1.00[EUR][1000 genomes]
rs73549387	1.00[EUR][1000 genomes]
rs73551204	1.00[EUR][1000 genomes]
rs73551214	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73551221	0.92[EUR][1000 genomes]
rs73551224	0.85[EUR][1000 genomes]
rs73551228	0.92[EUR][1000 genomes]
rs73551230	0.92[EUR][1000 genomes]
rs73551233	0.92[EUR][1000 genomes]
rs73551238	0.92[EUR][1000 genomes]
rs7498593	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7499413	1.00[EUR][1000 genomes]
rs8044842	0.96[EUR][1000 genomes]
rs8046175	0.92[EUR][1000 genomes]
rs8047754	0.96[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs8051273	1.00[EUR][1000 genomes]
rs8052294	0.92[EUR][1000 genomes]
rs8053323	1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8054017	0.92[EUR][1000 genomes]
rs8054582	0.92[EUR][1000 genomes]
rs8055882	0.96[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs8063584	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs9328591	1.00[CEU][hapmap];0.95[YRI][hapmap]
rs9328592	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9328600	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9921542	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9921947	0.96[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs9922381	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9922569	1.00[CEU][hapmap];0.85[YRI][hapmap];0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9926490	0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9927084	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9928466	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9928688	0.96[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9932230	1.00[CEU][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9933052	0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9935427	1.00[CEU][hapmap];0.95[YRI][hapmap];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9935641	0.96[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9936361	0.82[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9936434	1.00[CEU][hapmap];0.91[YRI][hapmap]
rs9936810	0.96[AMR][1000 genomes];0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:16 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1795199	chr16:47111119-47732476	Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Enhancers Bivalent/Poised TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
2	nsv916572	chr16:47227786-47646103	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
3	nsv933151	chr16:47236330-47646103	Weak transcription Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
4	esv2757637	chr16:47261512-47595005	Weak transcription ZNF genes & repeats Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
5	esv2758644	chr16:47261512-47606287	Weak transcription Strong transcription Enhancers ZNF genes & repeats Active TSS Genic enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
6	nsv1060396	chr16:47264261-47469345	Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
7	nsv428656	chr16:47316866-47469918	Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
8	esv2758423	chr16:47316866-47606287	Weak transcription Strong transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
9	nsv427983	chr16:47316866-47606287	Strong transcription Enhancers ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
10	nsv533068	chr16:47354593-47559639	ZNF genes & repeats Flanking Active TSS Strong transcription Weak transcription Active TSS Enhancers Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
11	nsv833217	chr16:47358148-47527655	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
12	esv34317	chr16:47390600-47672479	Weak transcription ZNF genes & repeats Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
13	esv1822041	chr16:47399460-47569732	Strong transcription Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Enhancers Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
14	nsv572537	chr16:47411203-47599502	Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
15	nsv520355	chr16:47424828-48164777	Weak transcription Flanking Active TSS Active TSS Enhancers Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
16	nsv960006	chr16:47435751-47460534	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs13334239	Hs.42217	cis	multi-tissue	Pritchard

Chromatin state (count:105 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:47393000-47458200	Weak transcription	Pancreas	Pancrea
2	chr16:47393000-47459000	Weak transcription	NHDF-Ad	bronchial
3	chr16:47397800-47458800	Weak transcription	Colonic Mucosa	Colon
4	chr16:47404400-47458800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr16:47404800-47458600	Weak transcription	Aorta	Aorta
6	chr16:47405600-47458200	Weak transcription	Brain Anterior Caudate	brain
7	chr16:47409600-47458600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
8	chr16:47409600-47458600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr16:47410000-47458400	Weak transcription	Stomach Smooth Muscle	stomach
10	chr16:47424600-47458400	Weak transcription	Brain Angular Gyrus	brain
11	chr16:47426400-47458600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
12	chr16:47426400-47482800	Weak transcription	NH-A	brain
13	chr16:47426600-47458600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr16:47426600-47459000	Weak transcription	Osteobl	bone
15	chr16:47427200-47458600	Weak transcription	Gastric	stomach
16	chr16:47428600-47458200	Weak transcription	Brain Substantia Nigra	brain
17	chr16:47428600-47458600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
18	chr16:47430200-47458800	Weak transcription	Right Ventricle	heart
19	chr16:47430400-47485600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
20	chr16:47430600-47458200	Weak transcription	Fetal Muscle Leg	muscle
21	chr16:47430600-47458600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
22	chr16:47430600-47458600	Weak transcription	Primary hematopoietic stem cells	blood
23	chr16:47431000-47458200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
24	chr16:47431400-47458600	Weak transcription	Rectal Mucosa Donor 31	rectum
25	chr16:47431600-47478200	Weak transcription	K562	blood
26	chr16:47431800-47458600	Weak transcription	Sigmoid Colon	Sigmoid Colon
27	chr16:47431800-47470000	Weak transcription	Psoas Muscle	Psoas
28	chr16:47433000-47458800	Weak transcription	Brain Hippocampus Middle	brain
29	chr16:47433000-47459000	Weak transcription	Brain Inferior Temporal Lobe	brain
30	chr16:47434400-47458200	Weak transcription	Left Ventricle	heart
31	chr16:47434600-47458400	Weak transcription	Skeletal Muscle Male	skeletal muscle
32	chr16:47437000-47458800	Weak transcription	HSMMtube	muscle
33	chr16:47437200-47458200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
34	chr16:47441600-47458600	Weak transcription	Primary monocytes fromperipheralblood	blood
35	chr16:47442600-47458600	Weak transcription	Muscle Satellite Cultured Cells	--
36	chr16:47442600-47458800	Weak transcription	Primary B cells from cord blood	blood
37	chr16:47442600-47483800	Weak transcription	Hela-S3	cervix
38	chr16:47442800-47458800	Weak transcription	Rectal Smooth Muscle	rectum
39	chr16:47443800-47459200	Weak transcription	Fetal Brain Female	brain
40	chr16:47444600-47458600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
41	chr16:47444800-47458000	Weak transcription	Brain Germinal Matrix	brain
42	chr16:47445200-47458600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
43	chr16:47445200-47458600	Weak transcription	Thymus	Thymus
44	chr16:47445200-47458800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
45	chr16:47445200-47458800	Weak transcription	Esophagus	oesophagus
46	chr16:47445400-47458800	Weak transcription	Spleen	Spleen
47	chr16:47445400-47482600	Weak transcription	NHEK	skin
48	chr16:47445600-47458800	Weak transcription	Lung	lung
49	chr16:47445800-47458200	Weak transcription	Primary T helper cells fromperipheralblood	blood
50	chr16:47445800-47458200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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