Variant report

Variant	rs2062968
Chromosome Location	chr16:47292816-47292817
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:35)
CpG islands
(count:0)
Chromatin interactive
region (count:1)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:35 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	RAD21	chr16:47292732-47293228	HCT-116	colon:	n/a	n/a
2	CTCF	chr16:47292763-47293160	GM12878	blood:	n/a	n/a
3	RAD21	chr16:47292703-47293216	HepG2	liver:	n/a	n/a
4	RAD21	chr16:47292619-47293402	SK-N-SH	brain:	n/a	n/a
5	CTCF	chr16:47292672-47293200	SK-N-SH	brain:	n/a	n/a
6	RAD21	chr16:47292808-47293100	SK-N-SH_RA	brain:	n/a	n/a
7	CTCF	chr16:47292780-47292930	WI-38	lung:	n/a	n/a
8	SMC3	chr16:47292791-47293156	HepG2	liver:	n/a	n/a
9	ZNF143	chr16:47292803-47293108	K562	blood:	n/a	n/a
10	RAD21	chr16:47292708-47293226	HCT-116	colon:	n/a	n/a
11	CTCF	chr16:47292727-47293243	HCT-116	colon:	n/a	n/a
12	RAD21	chr16:47292816-47293255	A549	lung:	n/a	n/a
13	RAD21	chr16:47292800-47293186	H1-hESC	embryonic stem cell:	n/a	n/a
14	RAD21	chr16:47292703-47293213	MCF-7	breast:	n/a	n/a
15	CTCF	chr16:47292780-47292930	HAc	cerebellar:	n/a	n/a
16	CTCF	chr16:47292744-47293103	K562	blood:	n/a	n/a
17	RAD21	chr16:47292775-47293186	MCF-7	breast:	n/a	n/a
18	SMC3	chr16:47292816-47293147	Hela-S3	cervix:	n/a	n/a
19	CTCF	chr16:47292736-47293149	HCT-116	colon:	n/a	n/a
20	RAD21	chr16:47292781-47293122	H1-hESC	embryonic stem cell:	n/a	n/a
21	RAD21	chr16:47292726-47293221	ECC-1	luminal epithelium:	n/a	n/a
22	RAD21	chr16:47292796-47293110	ECC-1	luminal epithelium:	n/a	n/a
23	RAD21	chr16:47292795-47293174	Hela-S3	cervix:	n/a	n/a
24	CTCF	chr16:47292786-47293068	K562	blood:	n/a	n/a
25	CTCF	chr16:47292766-47293151	IMR90	lung:	n/a	n/a
26	CTCF	chr16:47292776-47293166	K562	blood:	n/a	n/a
27	RAD21	chr16:47292790-47293178	IMR90	lung:	n/a	n/a
28	SMC3	chr16:47292802-47293240	SK-N-SH	brain:	n/a	n/a
29	CTCF	chr16:47292771-47293134	A549	lung:	n/a	n/a
30	SMC3	chr16:47292783-47293142	GM12878	blood:	n/a	n/a
31	RAD21	chr16:47292804-47293180	HepG2	liver:	n/a	n/a
32	ZNF143	chr16:47292799-47293125	GM12878	blood:	n/a	n/a
33	CTCF	chr16:47292800-47292950	HCM	heart:	n/a	n/a
34	CTCF	chr16:47292542-47293338	A549	lung:	n/a	n/a
35	CTCF	chr16:47292816-47293136	MCF-7	breast:	n/a	n/a

No data

(count:1 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr16:47290498..47293236-chr16:47492799..47495777,2	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000260012	TF binding region
ITFG1	TF binding region
ENSG00000102893	Chromatin interaction
ENSG00000129636	Chromatin interaction

Extended variants
information (count: 163 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:147)

rs_ID	r²[population]
rs1018171	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11859615	1.00[CHB][hapmap];0.89[EUR][1000 genomes]
rs11860257	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11860969	0.89[EUR][1000 genomes]
rs11861008	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11862096	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11862517	0.88[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11865790	1.00[CEU][hapmap];0.92[YRI][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs13330181	0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13330194	0.86[EUR][1000 genomes]
rs13330699	0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13330832	1.00[CEU][hapmap];0.96[YRI][hapmap];0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13331418	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13332032	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13332800	1.00[CHB][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13333003	0.94[AFR][1000 genomes];0.92[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13334239	0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13334342	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13334981	0.86[EUR][1000 genomes]
rs13335171	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13336943	0.82[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13338489	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13339357	0.88[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13339406	1.00[CHB][hapmap];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1541589	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16945353	1.00[CEU][hapmap];0.92[YRI][hapmap];0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16945354	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16945357	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[YRI][hapmap];0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945358	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945372	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945379	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945382	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945386	1.00[ASN][1000 genomes]
rs16945387	0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs16945401	1.00[ASN][1000 genomes]
rs16952126	0.89[EUR][1000 genomes]
rs16952129	0.89[EUR][1000 genomes]
rs16952174	1.00[CHB][hapmap];0.89[EUR][1000 genomes]
rs16952501	0.89[EUR][1000 genomes]
rs16952538	0.89[EUR][1000 genomes]
rs16952589	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs16952886	1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs16953067	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs16953992	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16954067	1.00[CHB][hapmap];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs16955095	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16955781	0.92[EUR][1000 genomes]
rs16956024	0.92[EUR][1000 genomes]
rs16956031	0.92[EUR][1000 genomes]
rs16956083	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16956093	0.92[EUR][1000 genomes]
rs2078256	0.89[YRI][hapmap];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2231981	0.89[EUR][1000 genomes]
rs28450418	0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs28457669	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs28482463	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28532949	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs28566542	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28577929	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs28681341	0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs28840689	0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs28844885	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28898390	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4386162	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs56819508	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs56830681	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57543382	0.92[EUR][1000 genomes]
rs57772915	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs57884999	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58251914	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs58837077	0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59305841	0.89[EUR][1000 genomes]
rs59453301	0.92[EUR][1000 genomes]
rs59547333	0.92[EUR][1000 genomes]
rs59992453	0.81[EUR][1000 genomes]
rs60237214	0.89[EUR][1000 genomes]
rs61078258	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6598800	0.92[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7184206	1.00[CHB][hapmap];0.81[YRI][hapmap];0.92[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7185641	1.00[CEU][hapmap];1.00[CHB][hapmap];0.85[YRI][hapmap];0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7185915	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7186492	0.89[EUR][1000 genomes]
rs7188942	0.89[EUR][1000 genomes]
rs7192537	0.92[EUR][1000 genomes]
rs7194190	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7197586	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7197973	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7199958	1.00[CEU][hapmap];0.93[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7200041	0.86[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7200149	0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7200554	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7201148	0.89[EUR][1000 genomes]
rs7202716	0.87[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs7202975	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7204944	1.00[CEU][hapmap];1.00[CHB][hapmap];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7206669	1.00[CHB][hapmap];0.80[EUR][1000 genomes]
rs73536876	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs73536884	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs73536895	0.89[EUR][1000 genomes]
rs73536899	0.89[EUR][1000 genomes]
rs73538910	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73538974	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73538980	1.00[EUR][1000 genomes]
rs73538991	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73538993	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs73538997	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73539001	0.92[EUR][1000 genomes]
rs73541004	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73541007	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73541010	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73541086	0.92[EUR][1000 genomes]
rs73541089	0.92[EUR][1000 genomes]
rs73541102	0.92[EUR][1000 genomes]
rs73543108	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73543111	0.88[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73543118	0.92[EUR][1000 genomes]
rs73547271	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73547284	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73547290	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73547296	1.00[ASN][1000 genomes]
rs73549309	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73549315	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73549319	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73549387	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7498593	0.92[EUR][1000 genomes]
rs7499413	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8044842	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs8047754	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8048801	0.89[EUR][1000 genomes]
rs8053323	0.96[YRI][hapmap];0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs8055882	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8063584	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs9328592	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9328707	1.00[CHB][hapmap];0.89[EUR][1000 genomes]
rs9921947	0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs9922569	1.00[CEU][hapmap];1.00[CHB][hapmap];0.85[YRI][hapmap];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9922635	0.89[EUR][1000 genomes]
rs9923731	0.89[EUR][1000 genomes]
rs9926490	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9926965	0.89[EUR][1000 genomes]
rs9927084	1.00[CEU][hapmap];0.93[AFR][1000 genomes];0.92[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9928466	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9928688	1.00[YRI][hapmap];0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9932230	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[YRI][hapmap];0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9933052	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9935641	0.96[YRI][hapmap];0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9936810	1.00[CHB][hapmap];0.96[YRI][hapmap];0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:16 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1059456	chr16:46463770-47307580	Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	65 gene(s)	inside rSNPs	diseases
2	nsv1066115	chr16:46463770-47318415	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	65 gene(s)	inside rSNPs	diseases
3	esv1795199	chr16:47111119-47732476	Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Enhancers Bivalent/Poised TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
4	esv1803802	chr16:47115776-47367144	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Strong transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
5	nsv906660	chr16:47123724-47347780	Strong transcription Enhancers Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
6	nsv1059763	chr16:47147194-47373834	ZNF genes & repeats Strong transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
7	nsv528423	chr16:47163874-47347780	Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Enhancers ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
8	esv1821100	chr16:47171333-47330244	Bivalent/Poised TSS Strong transcription Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
9	nsv525170	chr16:47194051-47303635	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
10	esv1821089	chr16:47223418-47330244	ZNF genes & repeats Weak transcription Enhancers Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
11	esv1832105	chr16:47223418-47347780	Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
12	nsv916572	chr16:47227786-47646103	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
13	nsv933151	chr16:47236330-47646103	Weak transcription Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
14	esv2757637	chr16:47261512-47595005	Weak transcription ZNF genes & repeats Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
15	esv2758644	chr16:47261512-47606287	Weak transcription Strong transcription Enhancers ZNF genes & repeats Active TSS Genic enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
16	nsv1060396	chr16:47264261-47469345	Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:107 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:47178800-47296600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr16:47230000-47332600	Weak transcription	Thymus	Thymus
3	chr16:47231800-47298600	Weak transcription	Right Ventricle	heart
4	chr16:47245400-47294400	Weak transcription	Pancreas	Pancrea
5	chr16:47246800-47298600	Weak transcription	Brain Angular Gyrus	brain
6	chr16:47247200-47299000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr16:47250400-47296600	Weak transcription	Lung	lung
8	chr16:47253200-47294400	Weak transcription	Colon Smooth Muscle	Colon
9	chr16:47253400-47294800	Weak transcription	Psoas Muscle	Psoas
10	chr16:47258600-47298400	Weak transcription	Fetal Intestine Small	intestine
11	chr16:47259800-47298200	Weak transcription	Colonic Mucosa	Colon
12	chr16:47260800-47293800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
13	chr16:47262400-47296600	Weak transcription	Gastric	stomach
14	chr16:47263400-47294200	Weak transcription	Sigmoid Colon	Sigmoid Colon
15	chr16:47263600-47297200	Weak transcription	Stomach Smooth Muscle	stomach
16	chr16:47264200-47321000	Weak transcription	Muscle Satellite Cultured Cells	--
17	chr16:47264600-47296600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
18	chr16:47264600-47296600	Weak transcription	Aorta	Aorta
19	chr16:47264600-47296600	Weak transcription	Spleen	Spleen
20	chr16:47266000-47298800	Weak transcription	Brain Anterior Caudate	brain
21	chr16:47269400-47298400	Weak transcription	NHEK	skin
22	chr16:47274200-47293600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
23	chr16:47276400-47297200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
24	chr16:47281600-47296400	Weak transcription	Brain Substantia Nigra	brain
25	chr16:47282200-47321000	Weak transcription	Brain Hippocampus Middle	brain
26	chr16:47282400-47305000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
27	chr16:47282800-47295800	Weak transcription	NH-A	brain
28	chr16:47285200-47297200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
29	chr16:47285200-47305000	Weak transcription	Brain Inferior Temporal Lobe	brain
30	chr16:47285400-47294000	Weak transcription	Ovary	ovary
31	chr16:47285400-47296600	Weak transcription	Fetal Stomach	stomach
32	chr16:47286400-47295000	Strong transcription	Primary T cells from cord blood	blood
33	chr16:47286600-47298000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
34	chr16:47286800-47299000	Weak transcription	Fetal Lung	lung
35	chr16:47287200-47298000	Weak transcription	Fetal Brain Female	brain
36	chr16:47287600-47295800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
37	chr16:47287600-47298400	Weak transcription	A549	lung
38	chr16:47288200-47297800	Weak transcription	HUES64 Cell Line	embryonic stem cell
39	chr16:47289000-47293000	Strong transcription	Primary B cells from cord blood	blood
40	chr16:47289200-47320600	Weak transcription	Small Intestine	intestine
41	chr16:47289600-47298400	Weak transcription	Fetal Brain Male	brain
42	chr16:47289800-47296400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
43	chr16:47290000-47295200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
44	chr16:47290400-47295800	Weak transcription	HUES48 Cell Line	embryonic stem cell
45	chr16:47290600-47293600	Strong transcription	Duodenum Smooth Muscle	Duodenum
46	chr16:47290600-47293600	Weak transcription	Placenta Amnion	Placenta Amnion
47	chr16:47290600-47296600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
48	chr16:47290600-47298800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
49	chr16:47290800-47294200	Weak transcription	HMEC	breast
50	chr16:47291000-47293200	Strong transcription	Rectal Mucosa Donor 31	rectum

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