The 2.0 version of rSNPBase

Variant report

Variant rs11861008
Chromosome Location chr16:47503647-47503648
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:47496200-47515000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr16:47496200-47526400 Weak transcription Pancreas Pancrea
3 chr16:47496200-47532000 Weak transcription Ovary ovary
4 chr16:47496200-47538400 Weak transcription NH-A brain
5 chr16:47496400-47506200 Weak transcription Fetal Thymus thymus
6 chr16:47496400-47512000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr16:47496400-47523400 Weak transcription Fetal Lung lung
8 chr16:47496600-47509800 Weak transcription Lung lung
9 chr16:47496600-47522600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
10 chr16:47497000-47522400 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr16:47497200-47511400 Weak transcription NHLF lung
12 chr16:47497200-47515600 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr16:47497200-47521600 Weak transcription Primary neutrophils fromperipheralblood blood
14 chr16:47497800-47509800 Weak transcription Pancreatic Islets Pancreatic Islet
15 chr16:47498200-47509800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr16:47498200-47517600 Weak transcription A549 lung
17 chr16:47498200-47527800 Weak transcription Small Intestine intestine
18 chr16:47498400-47504200 Weak transcription Aorta Aorta
19 chr16:47498400-47509400 Weak transcription Osteobl bone
20 chr16:47498400-47521400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr16:47498400-47521600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr16:47498400-47526000 Weak transcription Primary T cells fromperipheralblood blood
23 chr16:47498600-47504400 Weak transcription Left Ventricle heart
24 chr16:47498600-47506600 Weak transcription HUVEC blood vessel
25 chr16:47498600-47518200 Weak transcription Fetal Muscle Trunk muscle
26 chr16:47498800-47504200 Weak transcription Duodenum Mucosa Duodenum
27 chr16:47498800-47504400 Weak transcription Primary T regulatory cells fromperipheralblood blood
28 chr16:47498800-47507000 Weak transcription Fetal Brain Female brain
29 chr16:47498800-47510600 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr16:47498800-47516600 Weak transcription Fetal Muscle Leg muscle
31 chr16:47498800-47517400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr16:47498800-47526400 Weak transcription Esophagus oesophagus
33 chr16:47499000-47504200 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr16:47499000-47504800 Weak transcription Brain Inferior Temporal Lobe brain
35 chr16:47499000-47517200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr16:47499000-47526400 Weak transcription Fetal Stomach stomach
37 chr16:47499400-47509200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr16:47499400-47515600 Weak transcription Primary T cells from cord blood blood
39 chr16:47499400-47517800 Weak transcription Primary T helper naive cells from peripheral blood blood
40 chr16:47499400-47518600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
41 chr16:47499400-47523400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr16:47499600-47508200 Weak transcription Brain Angular Gyrus brain
43 chr16:47499800-47504800 Weak transcription Primary monocytes fromperipheralblood blood
44 chr16:47500200-47512800 Weak transcription Primary T helper cells PMA-I stimulated --
45 chr16:47500200-47512800 Weak transcription Rectal Smooth Muscle rectum
46 chr16:47500200-47517800 Weak transcription Primary T helper cells fromperipheralblood blood
47 chr16:47500400-47505600 Weak transcription Stomach Smooth Muscle stomach
48 chr16:47500400-47506400 Strong transcription Primary B cells from cord blood blood
49 chr16:47500400-47510800 Weak transcription Colon Smooth Muscle Colon
50 chr16:47500400-47512800 Weak transcription Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015