The 2.0 version of rSNPBase

Variant report

Variant rs73547271
Chromosome Location chr16:47477648-47477649
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:47426400-47482800 Weak transcription NH-A brain
2 chr16:47430400-47485600 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr16:47431600-47478200 Weak transcription K562 blood
4 chr16:47442600-47483800 Weak transcription Hela-S3 cervix
5 chr16:47445400-47482600 Weak transcription NHEK skin
6 chr16:47445800-47483800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr16:47451600-47484000 Weak transcription Small Intestine intestine
8 chr16:47459200-47493400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr16:47459400-47484000 Weak transcription Pancreas Pancrea
10 chr16:47459400-47487200 Weak transcription H9 Cell Line embryonic stem cell
11 chr16:47459400-47493800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr16:47459600-47487200 Weak transcription Rectal Smooth Muscle rectum
13 chr16:47459600-47493400 Weak transcription Esophagus oesophagus
14 chr16:47459800-47484600 Weak transcription Placenta Amnion Placenta Amnion
15 chr16:47459800-47484800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr16:47459800-47493400 Weak transcription Right Ventricle heart
17 chr16:47459800-47494400 Weak transcription Aorta Aorta
18 chr16:47460000-47485400 Weak transcription HSMMtube muscle
19 chr16:47460200-47479600 Weak transcription Ovary ovary
20 chr16:47460200-47482600 Weak transcription Muscle Satellite Cultured Cells --
21 chr16:47460200-47482800 Weak transcription Brain Germinal Matrix brain
22 chr16:47460200-47483800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr16:47460200-47485600 Weak transcription Colonic Mucosa Colon
24 chr16:47460200-47485600 Weak transcription NHLF lung
25 chr16:47460200-47486800 Weak transcription Fetal Kidney kidney
26 chr16:47460400-47479400 Weak transcription HepG2 liver
27 chr16:47460400-47483400 Weak transcription Fetal Brain Male brain
28 chr16:47461400-47482800 Weak transcription A549 lung
29 chr16:47461600-47485600 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr16:47461800-47485400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr16:47462000-47479400 Weak transcription Fetal Intestine Large intestine
32 chr16:47462000-47479600 Weak transcription Primary T cells fromperipheralblood blood
33 chr16:47462000-47479600 Weak transcription Adipose Nuclei Adipose
34 chr16:47462000-47479600 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr16:47462000-47479800 Weak transcription Brain Hippocampus Middle brain
36 chr16:47462000-47480400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr16:47462000-47482600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr16:47462000-47482600 Weak transcription Fetal Lung lung
39 chr16:47462000-47482800 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr16:47462000-47482800 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr16:47462000-47482800 Weak transcription Osteobl bone
42 chr16:47462000-47483000 Weak transcription Fetal Muscle Leg muscle
43 chr16:47462000-47483800 Weak transcription Stomach Smooth Muscle stomach
44 chr16:47462000-47484000 Weak transcription Thymus Thymus
45 chr16:47462000-47484200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
46 chr16:47462000-47485600 Weak transcription Primary T killer memory cells from peripheral blood blood
47 chr16:47462000-47486800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
48 chr16:47462000-47493400 Weak transcription Gastric stomach
49 chr16:47462000-47493400 Weak transcription Spleen Spleen
50 chr16:47462200-47479400 Weak transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015