Variant report

Variant	rs13332058
Chromosome Location	chr16:47617618-47617619
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr16:47617563..47619345-chr16:47643121..47645705,2	K562	blood:
2	chr16:47495780..47498159-chr16:47617442..47620173,2	K562	blood:

Variant related genes	Relation type
ENSG00000102893	Chromatin interaction
ENSG00000129636	Chromatin interaction

Extended variants
information (count: 272 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:265)

rs_ID	r²[population]
rs1011532	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10521162	0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10521163	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11860257	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11860828	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[YRI][hapmap];0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11861008	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11862096	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11862281	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[YRI][hapmap];0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11862517	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11863178	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11865790	1.00[CEU][hapmap];0.96[YRI][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1200967	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12102942	1.00[EUR][1000 genomes]
rs13330181	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13330337	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13330510	0.87[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13330699	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13331418	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13331748	1.00[EUR][1000 genomes]
rs13332032	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13332953	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13334239	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13334342	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[YRI][hapmap];0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13334408	1.00[EUR][1000 genomes]
rs13335171	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13335407	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13336200	1.00[EUR][1000 genomes]
rs13336943	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13337281	1.00[EUR][1000 genomes]
rs13337972	1.00[EUR][1000 genomes]
rs13338447	1.00[EUR][1000 genomes]
rs13338489	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13339357	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1486419	1.00[EUR][1000 genomes]
rs1541589	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16942513	0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945353	1.00[CEU][hapmap];0.96[YRI][hapmap];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16945354	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16945357	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[YRI][hapmap];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945358	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945372	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945379	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945382	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945386	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs16945387	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs16945401	1.00[ASN][1000 genomes]
rs16945408	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945413	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945430	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945438	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[YRI][hapmap];0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945443	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[YRI][hapmap];0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945460	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945474	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945493	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs16945509	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945543	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16945553	0.96[EUR][1000 genomes]
rs16945557	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes]
rs16945594	1.00[EUR][1000 genomes]
rs16945617	1.00[EUR][1000 genomes]
rs16945621	1.00[EUR][1000 genomes]
rs16945624	1.00[EUR][1000 genomes]
rs16945629	1.00[EUR][1000 genomes]
rs16945641	1.00[EUR][1000 genomes]
rs16945644	1.00[EUR][1000 genomes]
rs16945648	1.00[EUR][1000 genomes]
rs16945650	1.00[EUR][1000 genomes]
rs16945652	1.00[EUR][1000 genomes]
rs16945661	1.00[EUR][1000 genomes]
rs16945662	1.00[EUR][1000 genomes]
rs16955781	0.92[EUR][1000 genomes]
rs16956024	0.92[EUR][1000 genomes]
rs16956031	0.92[EUR][1000 genomes]
rs16956083	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16956093	0.92[EUR][1000 genomes]
rs1901903	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1973217	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2046531	1.00[EUR][1000 genomes]
rs2054000	0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2101373	1.00[EUR][1000 genomes]
rs2111226	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2341961	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28385551	1.00[EUR][1000 genomes]
rs28418647	0.96[EUR][1000 genomes]
rs28434188	0.96[EUR][1000 genomes]
rs28448361	1.00[EUR][1000 genomes]
rs28450418	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs28454787	0.96[EUR][1000 genomes]
rs28482463	0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28496502	0.96[EUR][1000 genomes]
rs28497443	1.00[EUR][1000 genomes]
rs28532949	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs28539472	0.96[EUR][1000 genomes]
rs28542319	1.00[EUR][1000 genomes]
rs28566542	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28577066	1.00[EUR][1000 genomes]
rs28577929	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs28581476	0.96[EUR][1000 genomes]
rs28590410	1.00[EUR][1000 genomes]
rs28597108	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[YRI][hapmap];0.97[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28630392	0.96[EUR][1000 genomes]
rs28679750	0.96[EUR][1000 genomes]
rs28681341	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs28688420	1.00[EUR][1000 genomes]
rs28690829	0.96[EUR][1000 genomes]
rs28712810	1.00[EUR][1000 genomes]
rs28754618	1.00[EUR][1000 genomes]
rs2880205	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28844885	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28853924	0.96[EUR][1000 genomes]
rs28865322	1.00[EUR][1000 genomes]
rs28898390	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4271615	1.00[EUR][1000 genomes]
rs56268318	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56687111	1.00[EUR][1000 genomes]
rs56830681	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57543382	0.92[EUR][1000 genomes]
rs57884999	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57930434	1.00[EUR][1000 genomes]
rs58190241	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58251914	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs58550976	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59453301	0.92[EUR][1000 genomes]
rs59547333	0.92[EUR][1000 genomes]
rs60049376	1.00[EUR][1000 genomes]
rs60200500	0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61053970	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61078258	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs61115457	1.00[EUR][1000 genomes]
rs61465994	1.00[EUR][1000 genomes]
rs6598598	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6598602	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6598613	1.00[EUR][1000 genomes]
rs7184358	1.00[EUR][1000 genomes]
rs7185641	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7185753	1.00[EUR][1000 genomes]
rs7185915	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[YRI][hapmap];0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7186530	1.00[EUR][1000 genomes]
rs7186864	1.00[EUR][1000 genomes]
rs7186924	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7187134	1.00[EUR][1000 genomes]
rs7187393	1.00[EUR][1000 genomes]
rs7189446	1.00[EUR][1000 genomes]
rs7190399	1.00[EUR][1000 genomes]
rs7192029	1.00[CEU][hapmap];1.00[CHB][hapmap]
rs7192537	0.92[EUR][1000 genomes]
rs7193794	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7194190	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7194249	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7195074	1.00[CEU][hapmap];1.00[CHB][hapmap];0.81[YRI][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7196244	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7197471	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7197586	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7197659	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7197882	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7199392	1.00[CEU][hapmap];1.00[CHB][hapmap];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7199696	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7199958	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7200041	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7200406	1.00[EUR][1000 genomes]
rs7200554	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7201764	1.00[EUR][1000 genomes]
rs7202145	1.00[EUR][1000 genomes]
rs7202175	1.00[CEU][hapmap];1.00[CHB][hapmap]
rs7202457	1.00[EUR][1000 genomes]
rs7202612	1.00[EUR][1000 genomes]
rs7202716	0.92[EUR][1000 genomes]
rs7203019	1.00[EUR][1000 genomes]
rs7204944	1.00[CEU][hapmap];1.00[CHB][hapmap];0.81[YRI][hapmap];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73534789	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73534794	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73536704	1.00[EUR][1000 genomes]
rs73536711	1.00[EUR][1000 genomes]
rs73536717	0.96[EUR][1000 genomes]
rs73536721	0.96[EUR][1000 genomes]
rs73536725	0.96[EUR][1000 genomes]
rs73536906	1.00[EUR][1000 genomes]
rs73536913	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73536920	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73536936	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73536939	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73541010	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73541086	0.92[EUR][1000 genomes]
rs73541089	0.92[EUR][1000 genomes]
rs73541102	0.92[EUR][1000 genomes]
rs73543108	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73543111	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73543118	0.92[EUR][1000 genomes]
rs73544253	1.00[EUR][1000 genomes]
rs73544267	1.00[EUR][1000 genomes]
rs73544271	1.00[EUR][1000 genomes]
rs73544281	1.00[EUR][1000 genomes]
rs73544284	1.00[EUR][1000 genomes]
rs73546131	1.00[EUR][1000 genomes]
rs73546132	1.00[EUR][1000 genomes]
rs73546138	1.00[EUR][1000 genomes]
rs73546141	1.00[EUR][1000 genomes]
rs73546143	1.00[EUR][1000 genomes]
rs73547271	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73547284	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73547290	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73547296	1.00[ASN][1000 genomes]
rs73549309	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73549315	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73549319	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73549387	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73551204	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73551214	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73551221	0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73551224	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73551228	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73551230	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73551233	0.92[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73551238	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73552163	1.00[EUR][1000 genomes]
rs73552167	1.00[EUR][1000 genomes]
rs7498593	0.92[EUR][1000 genomes]
rs7499413	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8044496	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8046175	0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8046259	1.00[EUR][1000 genomes]
rs8047342	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8048233	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8048279	1.00[EUR][1000 genomes]
rs8049111	1.00[EUR][1000 genomes]
rs8051273	0.92[EUR][1000 genomes]
rs8052294	0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8053042	1.00[EUR][1000 genomes]
rs8054017	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8054582	1.00[CEU][hapmap];1.00[CHB][hapmap];0.86[YRI][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8055624	1.00[EUR][1000 genomes]
rs8055695	1.00[EUR][1000 genomes]
rs8061062	1.00[EUR][1000 genomes]
rs8061556	1.00[EUR][1000 genomes]
rs8061656	1.00[EUR][1000 genomes]
rs8062269	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs876258	1.00[CEU][hapmap];1.00[CHB][hapmap];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9328591	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[YRI][hapmap]
rs9328592	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9328600	0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9746012	1.00[EUR][1000 genomes]
rs9746020	1.00[EUR][1000 genomes]
rs9746028	0.92[EUR][1000 genomes]
rs9921542	0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9922381	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[YRI][hapmap];0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9922569	1.00[CEU][hapmap];1.00[CHB][hapmap];0.89[YRI][hapmap];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9923591	1.00[EUR][1000 genomes]
rs9926490	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9926971	1.00[EUR][1000 genomes]
rs9927084	0.92[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9927829	1.00[EUR][1000 genomes]
rs9929392	1.00[EUR][1000 genomes]
rs9929794	1.00[EUR][1000 genomes]
rs9930026	1.00[EUR][1000 genomes]
rs9931638	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9932128	1.00[EUR][1000 genomes]
rs9932230	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9933052	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9934478	0.96[EUR][1000 genomes]
rs9935427	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9935542	1.00[EUR][1000 genomes]
rs9936361	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9936434	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[YRI][hapmap]
rs9936580	1.00[EUR][1000 genomes]
rs9940610	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1795199	chr16:47111119-47732476	Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Enhancers Bivalent/Poised TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
2	nsv916572	chr16:47227786-47646103	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
3	nsv933151	chr16:47236330-47646103	Weak transcription Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
4	esv34317	chr16:47390600-47672479	Weak transcription ZNF genes & repeats Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
5	nsv520355	chr16:47424828-48164777	Weak transcription Flanking Active TSS Active TSS Enhancers Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
6	esv1794084	chr16:47478207-47676184	Weak transcription ZNF genes & repeats Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
7	nsv525976	chr16:47583872-48035026	Strong transcription Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:97 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:47581000-47624200	Weak transcription	Brain Substantia Nigra	brain
2	chr16:47581200-47624600	Weak transcription	Colonic Mucosa	Colon
3	chr16:47581200-47627400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr16:47581400-47641800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr16:47581800-47621400	Weak transcription	Rectal Mucosa Donor 31	rectum
6	chr16:47582000-47624200	Weak transcription	Fetal Kidney	kidney
7	chr16:47582200-47625000	Weak transcription	Fetal Heart	heart
8	chr16:47584600-47624400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
9	chr16:47584600-47624400	Weak transcription	Colon Smooth Muscle	Colon
10	chr16:47584800-47622600	Weak transcription	Brain Angular Gyrus	brain
11	chr16:47588200-47622600	Weak transcription	Fetal Lung	lung
12	chr16:47588400-47622600	Weak transcription	Rectal Smooth Muscle	rectum
13	chr16:47588600-47622600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
14	chr16:47588600-47622600	Weak transcription	Rectal Mucosa Donor 29	rectum
15	chr16:47588800-47624600	Weak transcription	Gastric	stomach
16	chr16:47589400-47622400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
17	chr16:47596600-47627200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
18	chr16:47597200-47622600	Weak transcription	HSMMtube	muscle
19	chr16:47599400-47623600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
20	chr16:47599800-47622800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
21	chr16:47599800-47651200	Weak transcription	A549	lung
22	chr16:47600000-47624600	Weak transcription	HSMM	muscle
23	chr16:47600200-47622600	Weak transcription	Aorta	Aorta
24	chr16:47600800-47622600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
25	chr16:47600800-47622800	Weak transcription	Ovary	ovary
26	chr16:47601000-47624400	Weak transcription	Fetal Brain Male	brain
27	chr16:47602000-47622600	Weak transcription	Brain Hippocampus Middle	brain
28	chr16:47603200-47626000	Weak transcription	Stomach Mucosa	stomach
29	chr16:47606000-47625000	Weak transcription	Small Intestine	intestine
30	chr16:47606200-47622600	Weak transcription	Duodenum Smooth Muscle	Duodenum
31	chr16:47606200-47624400	Weak transcription	Fetal Brain Female	brain
32	chr16:47606600-47622600	Weak transcription	Fetal Muscle Leg	muscle
33	chr16:47607400-47622600	Weak transcription	Duodenum Mucosa	Duodenum
34	chr16:47607400-47624600	Weak transcription	Pancreas	Pancrea
35	chr16:47607400-47625600	Weak transcription	Hela-S3	cervix
36	chr16:47607600-47622600	Weak transcription	Lung	lung
37	chr16:47607600-47624600	Weak transcription	Esophagus	oesophagus
38	chr16:47607600-47625000	Weak transcription	Right Ventricle	heart
39	chr16:47607800-47622000	Weak transcription	HepG2	liver
40	chr16:47607800-47622600	Weak transcription	Cortex derived primary cultured neurospheres	brain
41	chr16:47607800-47622600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
42	chr16:47607800-47622600	Weak transcription	Stomach Smooth Muscle	stomach
43	chr16:47608200-47618400	Weak transcription	Left Ventricle	heart
44	chr16:47608200-47625400	Weak transcription	Fetal Intestine Small	intestine
45	chr16:47608400-47624200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
46	chr16:47608600-47622600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
47	chr16:47608800-47621600	Weak transcription	Primary T cells fromperipheralblood	blood
48	chr16:47608800-47621600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
49	chr16:47608800-47622400	Weak transcription	Fetal Intestine Large	intestine
50	chr16:47608800-47622600	Weak transcription	Thymus	Thymus

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