Variant report

Variant rs17223456
Chromosome Location chr6:146124594-146124595
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:146104600-146127000 Weak transcription Brain Hippocampus Middle brain
2 chr6:146105200-146134400 Weak transcription Thymus Thymus
3 chr6:146105400-146125800 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr6:146105800-146125600 Weak transcription Fetal Kidney kidney
5 chr6:146106000-146133600 Weak transcription Brain Cingulate Gyrus brain
6 chr6:146107000-146125600 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr6:146110200-146135000 Weak transcription Pancreas Pancrea
8 chr6:146112400-146125400 Weak transcription H9 Cell Line embryonic stem cell
9 chr6:146112400-146125400 Weak transcription Fetal Stomach stomach
10 chr6:146112400-146125600 Weak transcription Aorta Aorta
11 chr6:146112400-146125600 Weak transcription Brain Substantia Nigra brain
12 chr6:146112400-146135000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr6:146112600-146124600 Weak transcription Liver Liver
14 chr6:146112600-146125800 Weak transcription Fetal Brain Female brain
15 chr6:146113400-146133600 Weak transcription Brain Inferior Temporal Lobe brain
16 chr6:146113800-146126000 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr6:146114400-146125400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr6:146116400-146126600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr6:146116600-146124600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr6:146116800-146125400 Weak transcription Esophagus oesophagus
21 chr6:146116800-146126400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr6:146116800-146128600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr6:146117200-146126200 Weak transcription Primary T helper cells fromperipheralblood blood
24 chr6:146117400-146130400 Strong transcription HSMM muscle
25 chr6:146118000-146125600 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr6:146118400-146126400 Weak transcription Spleen Spleen
27 chr6:146118400-146128600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr6:146118800-146124800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr6:146118800-146125600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
30 chr6:146119000-146125600 Weak transcription Brain Anterior Caudate brain
31 chr6:146119000-146126200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr6:146119200-146125600 Weak transcription Ovary ovary
33 chr6:146119200-146134800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr6:146119400-146126400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr6:146119400-146127600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr6:146119400-146135000 Weak transcription Small Intestine intestine
37 chr6:146119600-146127400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr6:146119800-146125800 Weak transcription Primary neutrophils fromperipheralblood blood
39 chr6:146120000-146125800 Weak transcription Right Ventricle heart
40 chr6:146120200-146125400 Weak transcription Lung lung
41 chr6:146120200-146125600 Weak transcription NHDF-Ad bronchial
42 chr6:146120200-146127600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr6:146120200-146127600 Strong transcription Dnd41 blood
44 chr6:146120200-146128600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr6:146120200-146129800 Weak transcription Pancreatic Islets Pancreatic Islet
46 chr6:146120600-146128600 Strong transcription HUES64 Cell Line embryonic stem cell
47 chr6:146120800-146125600 Weak transcription Rectal Smooth Muscle rectum
48 chr6:146121200-146127600 Strong transcription Osteobl bone
49 chr6:146121200-146134600 Weak transcription Colonic Mucosa Colon
50 chr6:146121200-146134600 Weak transcription Placenta Amnion Placenta Amnion

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