The 2.0 version of rSNPBase

Variant report

Variant rs61041405
Chromosome Location chr6:145996285-145996286
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:145951000-146003000 Weak transcription Thymus Thymus
2 chr6:145951400-146003000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr6:145974200-146002800 Weak transcription Liver Liver
4 chr6:145974800-146003600 Weak transcription Primary T helper naive cells fromperipheralblood blood
5 chr6:145980600-146010800 Weak transcription Right Ventricle heart
6 chr6:145982800-146003000 Weak transcription Primary B cells from peripheral blood blood
7 chr6:145984400-146003000 Weak transcription Primary hematopoietic stem cells blood
8 chr6:145984600-145997600 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr6:145986600-146006400 Weak transcription Brain Cingulate Gyrus brain
10 chr6:145987600-146003000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr6:145988200-146002800 Weak transcription Primary T helper cells fromperipheralblood blood
12 chr6:145988400-146003000 Weak transcription Adipose Nuclei Adipose
13 chr6:145988400-146003000 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr6:145988600-146002800 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr6:145988600-146003000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr6:145988600-146003000 Weak transcription Brain Substantia Nigra brain
17 chr6:145989800-146003000 Weak transcription Duodenum Mucosa Duodenum
18 chr6:145990200-146003000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr6:145990600-146004400 Weak transcription Rectal Smooth Muscle rectum
20 chr6:145990800-146002800 Weak transcription Brain Anterior Caudate brain
21 chr6:145991000-145997600 Weak transcription Fetal Brain Female brain
22 chr6:145991000-146003200 Weak transcription Fetal Thymus thymus
23 chr6:145991200-145999200 Weak transcription Fetal Intestine Large intestine
24 chr6:145991200-146002800 Weak transcription Ovary ovary
25 chr6:145991200-146003000 Weak transcription Monocytes-CD14+_RO01746 blood
26 chr6:145991200-146008800 Weak transcription Brain Angular Gyrus brain
27 chr6:145991600-146002800 Weak transcription Colon Smooth Muscle Colon
28 chr6:145991800-146002800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr6:145991800-146009200 Weak transcription NHDF-Ad bronchial
30 chr6:145992400-146003000 Weak transcription Primary T helper cells PMA-I stimulated --
31 chr6:145993200-145998000 Weak transcription Brain Germinal Matrix brain
32 chr6:145993600-145997400 Weak transcription Fetal Intestine Small intestine
33 chr6:145994200-146002800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr6:145994600-146007000 Weak transcription Brain Inferior Temporal Lobe brain
35 chr6:145994800-146002800 Weak transcription Primary B cells from cord blood blood
36 chr6:145994800-146008400 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr6:145995000-146010800 Weak transcription Left Ventricle heart
38 chr6:145995200-146003000 Weak transcription Stomach Smooth Muscle stomach
39 chr6:145995200-146004000 Weak transcription Fetal Stomach stomach
40 chr6:145995200-146006400 Weak transcription Lung lung
41 chr6:145995200-146013200 Weak transcription Pancreas Pancrea
42 chr6:145995400-146003200 Weak transcription Aorta Aorta
43 chr6:145995600-145999000 Weak transcription Fetal Muscle Leg muscle
44 chr6:145995600-146000400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015