The 2.0 version of rSNPBase

Variant report

Variant rs73782053
Chromosome Location chr6:146004673-146004674
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:145980600-146010800 Weak transcription Right Ventricle heart
2 chr6:145986600-146006400 Weak transcription Brain Cingulate Gyrus brain
3 chr6:145991200-146008800 Weak transcription Brain Angular Gyrus brain
4 chr6:145991800-146009200 Weak transcription NHDF-Ad bronchial
5 chr6:145994600-146007000 Weak transcription Brain Inferior Temporal Lobe brain
6 chr6:145994800-146008400 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr6:145995000-146010800 Weak transcription Left Ventricle heart
8 chr6:145995200-146006400 Weak transcription Lung lung
9 chr6:145995200-146013200 Weak transcription Pancreas Pancrea
10 chr6:145998800-146010800 Weak transcription HSMMtube muscle
11 chr6:145999000-146010800 Weak transcription Psoas Muscle Psoas
12 chr6:145999600-146008600 Weak transcription Fetal Intestine Large intestine
13 chr6:146000600-146010600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr6:146001600-146006400 Weak transcription Primary T regulatory cells fromperipheralblood blood
15 chr6:146001600-146008800 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr6:146001800-146006400 Weak transcription Fetal Lung lung
17 chr6:146001800-146012200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr6:146002200-146007800 Weak transcription Primary T cells fromperipheralblood blood
19 chr6:146002400-146009400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr6:146002800-146005000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr6:146002800-146007400 Strong transcription Liver Liver
22 chr6:146003000-146005000 Strong transcription Primary B cells from peripheral blood blood
23 chr6:146003000-146005000 Strong transcription Stomach Smooth Muscle stomach
24 chr6:146003000-146006800 Strong transcription Adipose Nuclei Adipose
25 chr6:146003200-146008200 Weak transcription Primary T helper cells PMA-I stimulated --
26 chr6:146003200-146008800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr6:146003400-146006400 Weak transcription Brain Germinal Matrix brain
28 chr6:146003400-146007800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr6:146003400-146008600 Weak transcription Fetal Thymus thymus
30 chr6:146003400-146009000 Weak transcription Colon Smooth Muscle Colon
31 chr6:146003400-146009400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr6:146003400-146010800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr6:146003400-146011600 Weak transcription Brain Substantia Nigra brain
34 chr6:146003400-146033600 Weak transcription Brain Hippocampus Middle brain
35 chr6:146003600-146005800 Weak transcription Small Intestine intestine
36 chr6:146003600-146006400 Weak transcription Fetal Heart heart
37 chr6:146003600-146007400 Weak transcription Pancreatic Islets Pancreatic Islet
38 chr6:146003600-146008400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr6:146003600-146008400 Weak transcription Dnd41 blood
40 chr6:146003600-146008600 Weak transcription Fetal Brain Male brain
41 chr6:146003600-146009400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
42 chr6:146003600-146009600 Weak transcription HUES64 Cell Line embryonic stem cell
43 chr6:146003600-146009600 Weak transcription Primary hematopoietic stem cells blood
44 chr6:146003600-146010800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr6:146003600-146010800 Weak transcription Aorta Aorta
46 chr6:146003600-146020600 Weak transcription Primary T helper cells fromperipheralblood blood
47 chr6:146003600-146029400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr6:146003800-146007000 Strong transcription Primary B cells from cord blood blood
49 chr6:146003800-146007400 Weak transcription Primary T helper naive cells fromperipheralblood blood
50 chr6:146003800-146007400 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015