The 2.0 version of rSNPBase

Variant report

Variant rs73568402
Chromosome Location chr6:145950984-145950985
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:145937600-145952000 Weak transcription Psoas Muscle Psoas
2 chr6:145941600-145954200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr6:145942400-145955400 Weak transcription Esophagus oesophagus
4 chr6:145945200-145955400 Weak transcription Fetal Muscle Leg muscle
5 chr6:145945800-145955000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
6 chr6:145946000-145951600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr6:145946200-145955000 Weak transcription Stomach Mucosa stomach
8 chr6:145946400-145955600 Weak transcription Colon Smooth Muscle Colon
9 chr6:145946800-145952400 Weak transcription Fetal Brain Female brain
10 chr6:145946800-145955400 Weak transcription Primary T helper cells fromperipheralblood blood
11 chr6:145947000-145955400 Weak transcription Primary T helper cells PMA-I stimulated --
12 chr6:145947000-145955800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr6:145947200-145955400 Weak transcription Primary T cells fromperipheralblood blood
14 chr6:145947400-145952200 Strong transcription Primary T cells from cord blood blood
15 chr6:145947400-145955400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr6:145948000-145951200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr6:145948200-145951000 Strong transcription Fetal Intestine Small intestine
18 chr6:145948200-145951000 Strong transcription Fetal Stomach stomach
19 chr6:145948400-145951000 Weak transcription Colonic Mucosa Colon
20 chr6:145948600-145951000 Strong transcription Stomach Smooth Muscle stomach
21 chr6:145948600-145954600 Weak transcription Brain Anterior Caudate brain
22 chr6:145948800-145952000 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr6:145948800-145955400 Weak transcription Brain Substantia Nigra brain
24 chr6:145948800-145955400 Weak transcription Right Ventricle heart
25 chr6:145948800-145962400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
26 chr6:145949000-145952400 Weak transcription Gastric stomach
27 chr6:145949000-145952800 Weak transcription Right Atrium heart
28 chr6:145949000-145953400 Weak transcription Left Ventricle heart
29 chr6:145949000-145955400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
30 chr6:145949000-145955400 Weak transcription Brain Angular Gyrus brain
31 chr6:145949000-145955400 Weak transcription Pancreas Pancrea
32 chr6:145949000-145956200 Weak transcription Primary T helper naive cells fromperipheralblood blood
33 chr6:145949000-145968000 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr6:145949200-145951800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr6:145949200-145955400 Weak transcription Brain Hippocampus Middle brain
36 chr6:145949200-145955600 Weak transcription Fetal Thymus thymus
37 chr6:145950000-145951200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr6:145950200-145951200 Genic enhancers Skeletal Muscle Male skeletal muscle
39 chr6:145950200-145951400 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr6:145950400-145951000 Strong transcription Duodenum Smooth Muscle Duodenum
41 chr6:145950400-145951000 Strong transcription Ovary ovary
42 chr6:145950400-145951000 Strong transcription Thymus Thymus
43 chr6:145950400-145951200 Strong transcription Primary hematopoietic stem cells blood
44 chr6:145950400-145955400 Weak transcription Spleen Spleen
45 chr6:145950400-145955600 Weak transcription Primary hematopoietic stem cells short term culture blood
46 chr6:145950600-145951200 Enhancers Cortex derived primary cultured neurospheres brain
47 chr6:145950600-145951200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
48 chr6:145950600-145951200 ZNF genes & repeats Lung lung
49 chr6:145950600-145955400 Weak transcription Primary B cells from peripheral blood blood
50 chr6:145950800-145951000 Enhancers ES-I3 Cell Line embryonic stem cell

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Last update: Aug 31, 2015