Variant report

Variant	rs73577363
Chromosome Location	chr6:145961842-145961843
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:145854680..145857646-chr6:145960057..145962125,2	K562	blood:
2	chr6:145961253..145963846-chr6:145964196..145965730,2	MCF-7	breast:

Extended variants
information (count: 131 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:131)

rs_ID	r²[population]
rs12111090	0.95[AFR][1000 genomes]
rs12111476	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1591698	0.93[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs28479261	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28587324	0.93[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs28829296	0.93[AFR][1000 genomes]
rs4896845	0.82[AFR][1000 genomes]
rs4896847	0.82[AFR][1000 genomes]
rs55658016	0.93[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs55746945	0.93[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs55813779	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55814547	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55820518	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56116838	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56198487	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56282473	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56864636	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56950953	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57105639	0.93[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs57646957	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58588227	0.88[AFR][1000 genomes]
rs59135568	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59557516	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60162832	0.83[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs60609437	0.83[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs61014905	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61041405	0.95[AFR][1000 genomes]
rs61121433	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6570702	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs6570704	1.00[AMR][1000 genomes]
rs6570707	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6570709	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6570710	0.93[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs6570714	0.85[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs6570720	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs6900158	0.90[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs6901219	0.90[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs6901587	0.83[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs6902273	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6902358	0.83[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs6902952	0.98[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs6904060	1.00[AMR][1000 genomes]
rs6908707	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6913497	0.98[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs6914491	0.92[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs6918350	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6918739	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6919173	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6920248	0.89[AFR][1000 genomes]
rs6921110	0.90[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs6925420	1.00[AMR][1000 genomes]
rs6927960	0.93[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs6928780	0.93[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs6930335	0.93[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs6931280	0.93[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs6940415	0.98[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs6940752	1.00[AMR][1000 genomes]
rs6940930	1.00[AMR][1000 genomes]
rs73562628	1.00[AMR][1000 genomes]
rs73564486	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73566113	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs73566115	0.93[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs73566121	0.93[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs73566126	0.93[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs73566139	0.90[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs73566140	0.90[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs73566157	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs73566168	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs73566721	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73566724	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73566728	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73566742	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73566747	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73566751	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73566754	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73566757	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73568127	0.88[AFR][1000 genomes]
rs73568130	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs73568133	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs73568134	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs73568138	0.88[AFR][1000 genomes]
rs73568145	0.85[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs73568148	0.85[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs73568151	0.85[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs73568185	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs73568188	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs73568362	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73568366	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73568375	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73568383	1.00[AMR][1000 genomes]
rs73568384	1.00[AMR][1000 genomes]
rs73568389	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73568402	1.00[AMR][1000 genomes]
rs73577358	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73577384	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73579444	1.00[AMR][1000 genomes]
rs73579478	0.94[AFR][1000 genomes]
rs73579483	0.96[AFR][1000 genomes]
rs73579498	0.98[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs73782053	0.98[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs73782068	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs73784038	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73784067	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7738406	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7738822	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7738906	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7741139	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs7744082	0.98[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs7745379	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs7745722	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs7749377	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7750382	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7751866	1.00[AMR][1000 genomes]
rs7753694	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7753832	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs7754367	0.89[AFR][1000 genomes]
rs7757137	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7758839	0.98[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs7759254	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7761251	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs7761577	0.83[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs7763273	0.90[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs7768195	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7771112	0.81[AFR][1000 genomes]
rs7771653	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7772012	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7772550	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7773780	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs9718033	0.83[AFR][1000 genomes]
rs9766595	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9766596	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:145948800-145962400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr6:145949000-145968000	Weak transcription	Sigmoid Colon	Sigmoid Colon
3	chr6:145950800-145977400	Weak transcription	Aorta	Aorta
4	chr6:145950800-145990600	Weak transcription	Primary B cells from cord blood	blood
5	chr6:145951000-146003000	Weak transcription	Thymus	Thymus
6	chr6:145951400-146003000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
7	chr6:145952200-145983200	Weak transcription	Primary T cells from cord blood	blood
8	chr6:145955000-145962400	Weak transcription	Psoas Muscle	Psoas
9	chr6:145955200-145976800	Weak transcription	Duodenum Smooth Muscle	Duodenum
10	chr6:145955600-145977400	Weak transcription	Left Ventricle	heart
11	chr6:145960200-145978800	Weak transcription	Fetal Heart	heart

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