The 2.0 version of rSNPBase

Variant report

Variant rs2807991
Chromosome Location chr1:61579127-61579128
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:61554600-61581200 Weak transcription Esophagus oesophagus
2 chr1:61558600-61581200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr1:61558600-61586000 Weak transcription Fetal Intestine Small intestine
4 chr1:61559000-61582000 Weak transcription Hela-S3 cervix
5 chr1:61563600-61586000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr1:61563800-61585600 Weak transcription NHEK skin
7 chr1:61563800-61585800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr1:61564400-61587400 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr1:61567600-61581200 Weak transcription Ovary ovary
10 chr1:61567600-61582000 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr1:61568000-61580000 Weak transcription A549 lung
12 chr1:61569200-61581000 Weak transcription Stomach Mucosa stomach
13 chr1:61574600-61580000 Weak transcription K562 blood
14 chr1:61575000-61586200 Weak transcription Fetal Intestine Large intestine
15 chr1:61576000-61579600 Enhancers Brain Hippocampus Middle brain
16 chr1:61576000-61580600 Weak transcription Aorta Aorta
17 chr1:61576000-61582000 Weak transcription Fetal Adrenal Gland Adrenal Gland
18 chr1:61576200-61580000 Weak transcription Right Ventricle heart
19 chr1:61576600-61580000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
20 chr1:61576600-61580600 Weak transcription Duodenum Mucosa Duodenum
21 chr1:61576600-61580800 Weak transcription Fetal Muscle Leg muscle
22 chr1:61576600-61581000 Weak transcription Primary hematopoietic stem cells blood
23 chr1:61576600-61581000 Weak transcription Psoas Muscle Psoas
24 chr1:61576600-61581200 Weak transcription Fetal Stomach stomach
25 chr1:61576600-61581200 Weak transcription Spleen Spleen
26 chr1:61576800-61580400 Weak transcription Monocytes-CD14+_RO01746 blood
27 chr1:61576800-61581800 Weak transcription Pancreatic Islets Pancreatic Islet
28 chr1:61577200-61580600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr1:61577200-61581600 Weak transcription Fetal Lung lung
30 chr1:61577400-61580600 Weak transcription Primary monocytes fromperipheralblood blood
31 chr1:61577400-61580800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr1:61577400-61581000 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr1:61577400-61581200 Weak transcription Stomach Smooth Muscle stomach
34 chr1:61577400-61581600 Weak transcription Brain Inferior Temporal Lobe brain
35 chr1:61577400-61582000 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr1:61577400-61582000 Weak transcription Fetal Brain Female brain
37 chr1:61577400-61584800 Weak transcription Fetal Kidney kidney
38 chr1:61577600-61581000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
39 chr1:61577600-61581000 Weak transcription Colon Smooth Muscle Colon
40 chr1:61577600-61581200 Weak transcription Rectal Smooth Muscle rectum
41 chr1:61577800-61579400 Weak transcription Pancreas Pancrea
42 chr1:61577800-61579400 Weak transcription HepG2 liver
43 chr1:61577800-61581000 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr1:61577800-61581800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr1:61578200-61580400 Weak transcription Fetal Heart heart
46 chr1:61578200-61581000 Weak transcription Adipose Nuclei Adipose
47 chr1:61578200-61581800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr1:61578200-61582000 Weak transcription Brain Cingulate Gyrus brain
49 chr1:61578200-61582200 Weak transcription Brain Germinal Matrix brain
50 chr1:61578400-61581200 Weak transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015